Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MBD4O95243 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.87■□□□□ 0.45
MBD4O95243 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MBD4O95243 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MBD4O95243 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
MBD4O95243 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MBD4O95243 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
MBD4O95243 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.87■□□□□ 0.45
MBD4O95243 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.87■□□□□ 0.45
MBD4O95243 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
MBD4O95243 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MBD4O95243 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.87■□□□□ 0.45
MBD4O95243 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MBD4O95243 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MBD4O95243 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.87■□□□□ 0.45
MBD4O95243 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
MBD4O95243 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.87■□□□□ 0.45
MBD4O95243 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.87■□□□□ 0.45
MBD4O95243 AC131206.1-201ENST00000538078 1211 ntBASIC17.87■□□□□ 0.45
MBD4O95243 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.87■□□□□ 0.45
MBD4O95243 AL136301.1-201ENST00000615830 422 ntBASIC17.87■□□□□ 0.45
MBD4O95243 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.87■□□□□ 0.45
MBD4O95243 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.87■□□□□ 0.45
MBD4O95243 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.87■□□□□ 0.45
MBD4O95243 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
MBD4O95243 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MBD4O95243 NORAD-201ENST00000565493 5339 ntBASIC17.87■□□□□ 0.45
MBD4O95243 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
MBD4O95243 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
MBD4O95243 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MBD4O95243 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.87■□□□□ 0.45
MBD4O95243 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
MBD4O95243 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.87■□□□□ 0.45
MBD4O95243 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MBD4O95243 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 AC007292.2-201ENST00000593524 1812 ntBASIC17.86■□□□□ 0.45
MBD4O95243 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
MBD4O95243 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.86■□□□□ 0.45
MBD4O95243 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
MBD4O95243 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 PFN1P12-201ENST00000455938 534 ntBASIC17.86■□□□□ 0.45
MBD4O95243 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.86■□□□□ 0.45
MBD4O95243 MIR4525-201ENST00000580000 75 ntBASIC17.86■□□□□ 0.45
MBD4O95243 AC104982.3-201ENST00000581995 514 ntBASIC17.86■□□□□ 0.45
MBD4O95243 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
MBD4O95243 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
MBD4O95243 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
MBD4O95243 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
MBD4O95243 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MBD4O95243 AC013726.1-201ENST00000563747 2285 ntBASIC17.86■□□□□ 0.45
MBD4O95243 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD4O95243 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
MBD4O95243 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
MBD4O95243 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.85■□□□□ 0.45
MBD4O95243 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MBD4O95243 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MBD4O95243 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MBD4O95243 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
MBD4O95243 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.85■□□□□ 0.45
MBD4O95243 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MBD4O95243 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MBD4O95243 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.85■□□□□ 0.45
MBD4O95243 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MBD4O95243 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.85■□□□□ 0.45
MBD4O95243 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.85■□□□□ 0.45
MBD4O95243 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.85■□□□□ 0.45
MBD4O95243 AC018735.1-201ENST00000437208 1502 ntBASIC17.85■□□□□ 0.45
MBD4O95243 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.85■□□□□ 0.45
MBD4O95243 AC104306.2-201ENST00000451877 341 ntBASIC17.85■□□□□ 0.45
MBD4O95243 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MBD4O95243 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MBD4O95243 GCOM2-201ENST00000509133 1104 ntBASIC17.85■□□□□ 0.45
MBD4O95243 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
MBD4O95243 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.85■□□□□ 0.45
MBD4O95243 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.85■□□□□ 0.45
MBD4O95243 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.85■□□□□ 0.45
MBD4O95243 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.85■□□□□ 0.45
MBD4O95243 AL118558.3-201ENST00000607414 1079 ntBASIC17.85■□□□□ 0.45
MBD4O95243 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MBD4O95243 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MBD4O95243 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MBD4O95243 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MBD4O95243 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
MBD4O95243 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms