Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.37■□□□□ 0.69
LTN1O94822 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.37■□□□□ 0.69
LTN1O94822 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 PARN-202ENST00000420015 2360 ntTSL 2 BASIC19.37■□□□□ 0.69
LTN1O94822 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
LTN1O94822 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LTN1O94822 HLA-DMA-203ENST00000395305 777 ntBASIC19.37■□□□□ 0.69
LTN1O94822 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC19.37■□□□□ 0.69
LTN1O94822 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC19.37■□□□□ 0.69
LTN1O94822 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC19.37■□□□□ 0.69
LTN1O94822 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC19.37■□□□□ 0.69
LTN1O94822 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC19.37■□□□□ 0.69
LTN1O94822 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC19.37■□□□□ 0.69
LTN1O94822 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
LTN1O94822 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LTN1O94822 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC19.37■□□□□ 0.69
LTN1O94822 AC127024.7-201ENST00000625101 200 ntBASIC19.37■□□□□ 0.69
LTN1O94822 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LTN1O94822 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
LTN1O94822 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LTN1O94822 API5-208ENST00000531273 1868 ntTSL 2 BASIC19.36■□□□□ 0.69
LTN1O94822 AL591122.2-201ENST00000624125 1853 ntBASIC19.36■□□□□ 0.69
LTN1O94822 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LTN1O94822 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC19.36■□□□□ 0.69
LTN1O94822 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LTN1O94822 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC19.36■□□□□ 0.69
LTN1O94822 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LTN1O94822 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LTN1O94822 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LTN1O94822 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LTN1O94822 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LTN1O94822 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LTN1O94822 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC19.36■□□□□ 0.69
LTN1O94822 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LTN1O94822 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LTN1O94822 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LTN1O94822 GUSBP10-201ENST00000417412 665 ntBASIC19.36■□□□□ 0.69
LTN1O94822 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LTN1O94822 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC19.36■□□□□ 0.69
LTN1O94822 DPY19L2P5-201ENST00000456300 331 ntBASIC19.36■□□□□ 0.69
LTN1O94822 RNA5SP417-201ENST00000516459 108 ntBASIC19.36■□□□□ 0.69
LTN1O94822 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
LTN1O94822 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC19.36■□□□□ 0.69
LTN1O94822 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LTN1O94822 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LTN1O94822 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC19.36■□□□□ 0.69
LTN1O94822 MX1-218ENST00000619682 1980 ntTSL 5 BASIC19.36■□□□□ 0.69
LTN1O94822 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.36■□□□□ 0.69
LTN1O94822 AIRN-201ENST00000601203 4374 ntBASIC19.36■□□□□ 0.69
LTN1O94822 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LTN1O94822 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LTN1O94822 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.35■□□□□ 0.69
LTN1O94822 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LTN1O94822 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
LTN1O94822 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LTN1O94822 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LTN1O94822 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LTN1O94822 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LTN1O94822 PYY2-201ENST00000315776 282 ntBASIC19.35■□□□□ 0.69
LTN1O94822 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC19.35■□□□□ 0.69
LTN1O94822 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC19.35■□□□□ 0.69
LTN1O94822 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LTN1O94822 NAA40-205ENST00000539656 577 ntTSL 4 BASIC19.35■□□□□ 0.69
LTN1O94822 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC19.35■□□□□ 0.69
LTN1O94822 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC19.35■□□□□ 0.69
LTN1O94822 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
LTN1O94822 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.35■□□□□ 0.69
LTN1O94822 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC19.35■□□□□ 0.69
LTN1O94822 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC19.35■□□□□ 0.69
LTN1O94822 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
LTN1O94822 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LTN1O94822 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC19.35■□□□□ 0.69
LTN1O94822 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LTN1O94822 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
LTN1O94822 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC19.35■□□□□ 0.69
LTN1O94822 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
LTN1O94822 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LTN1O94822 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LTN1O94822 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC19.35■□□□□ 0.69
LTN1O94822 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LTN1O94822 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LTN1O94822 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LTN1O94822 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LTN1O94822 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.34■□□□□ 0.69
LTN1O94822 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LTN1O94822 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LTN1O94822 AL354861.1-201ENST00000445213 355 ntBASIC19.34■□□□□ 0.69
LTN1O94822 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC19.34■□□□□ 0.69
LTN1O94822 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LTN1O94822 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.34■□□□□ 0.69
LTN1O94822 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.34■□□□□ 0.69
LTN1O94822 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
LTN1O94822 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LTN1O94822 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LTN1O94822 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms