Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.31■□□□□ 0.04
RIPK2O43353 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.31■□□□□ 0.04
RIPK2O43353 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RIPK2O43353 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RIPK2O43353 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.31■□□□□ 0.04
RIPK2O43353 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
RIPK2O43353 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RIPK2O43353 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.3■□□□□ 0.04
RIPK2O43353 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.3■□□□□ 0.04
RIPK2O43353 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
RIPK2O43353 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RIPK2O43353 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.3■□□□□ 0.04
RIPK2O43353 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.3■□□□□ 0.04
RIPK2O43353 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
RIPK2O43353 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.3■□□□□ 0.04
RIPK2O43353 MIR940-201ENST00000401276 94 ntBASIC15.3■□□□□ 0.04
RIPK2O43353 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.3■□□□□ 0.04
RIPK2O43353 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RIPK2O43353 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.3■□□□□ 0.04
RIPK2O43353 AC023794.5-201ENST00000564380 2157 ntBASIC15.3■□□□□ 0.04
RIPK2O43353 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.3■□□□□ 0.04
RIPK2O43353 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
RIPK2O43353 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
RIPK2O43353 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.3■□□□□ 0.04
RIPK2O43353 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
RIPK2O43353 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.3■□□□□ 0.04
RIPK2O43353 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.3■□□□□ 0.04
RIPK2O43353 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.3■□□□□ 0.04
RIPK2O43353 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RIPK2O43353 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
RIPK2O43353 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.29■□□□□ 0.04
RIPK2O43353 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RIPK2O43353 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RIPK2O43353 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
RIPK2O43353 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RIPK2O43353 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.29■□□□□ 0.04
RIPK2O43353 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 AC093525.8-201ENST00000624099 1342 ntBASIC15.29■□□□□ 0.04
RIPK2O43353 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RIPK2O43353 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RIPK2O43353 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RIPK2O43353 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.29■□□□□ 0.04
RIPK2O43353 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.29■□□□□ 0.04
RIPK2O43353 FDX1P1-201ENST00000449115 551 ntBASIC15.29■□□□□ 0.04
RIPK2O43353 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.29■□□□□ 0.04
RIPK2O43353 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.29■□□□□ 0.04
RIPK2O43353 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.29■□□□□ 0.04
RIPK2O43353 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.29■□□□□ 0.04
RIPK2O43353 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.29■□□□□ 0.04
RIPK2O43353 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RIPK2O43353 AC010336.2-201ENST00000564226 506 ntBASIC15.29■□□□□ 0.04
RIPK2O43353 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms