Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
TSPAN4O14817 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
TSPAN4O14817 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.78□□□□□ -0.36
TSPAN4O14817 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
TSPAN4O14817 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.78□□□□□ -0.36
TSPAN4O14817 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
TSPAN4O14817 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 MIR648-201ENST00000385046 94 ntBASIC12.78□□□□□ -0.36
TSPAN4O14817 AL022342.1-201ENST00000400363 863 ntBASIC12.78□□□□□ -0.36
TSPAN4O14817 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.78□□□□□ -0.36
TSPAN4O14817 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 AL591424.1-201ENST00000442569 1213 ntBASIC12.78□□□□□ -0.36
TSPAN4O14817 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.78□□□□□ -0.36
TSPAN4O14817 AC034105.1-201ENST00000563488 319 ntBASIC12.78□□□□□ -0.36
TSPAN4O14817 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 AP000845.1-201ENST00000581677 2131 ntBASIC12.78□□□□□ -0.36
TSPAN4O14817 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.78□□□□□ -0.36
TSPAN4O14817 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TSPAN4O14817 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.78□□□□□ -0.36
TSPAN4O14817 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.78□□□□□ -0.36
TSPAN4O14817 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
TSPAN4O14817 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
TSPAN4O14817 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC12.78□□□□□ -0.36
TSPAN4O14817 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.78□□□□□ -0.36
TSPAN4O14817 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.78□□□□□ -0.36
TSPAN4O14817 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 AC020658.7-201ENST00000624274 2442 ntBASIC12.78□□□□□ -0.36
TSPAN4O14817 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TSPAN4O14817 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TSPAN4O14817 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.77□□□□□ -0.36
TSPAN4O14817 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TSPAN4O14817 AC105250.1-201ENST00000509378 2057 ntBASIC12.77□□□□□ -0.36
TSPAN4O14817 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.77□□□□□ -0.36
TSPAN4O14817 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
TSPAN4O14817 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TSPAN4O14817 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
TSPAN4O14817 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TSPAN4O14817 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TSPAN4O14817 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.77□□□□□ -0.36
TSPAN4O14817 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TSPAN4O14817 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.77□□□□□ -0.36
TSPAN4O14817 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TSPAN4O14817 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.77□□□□□ -0.36
TSPAN4O14817 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
TSPAN4O14817 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TSPAN4O14817 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TSPAN4O14817 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TSPAN4O14817 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TSPAN4O14817 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.77□□□□□ -0.37
TSPAN4O14817 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TSPAN4O14817 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.77□□□□□ -0.37
TSPAN4O14817 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.77□□□□□ -0.37
TSPAN4O14817 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.77□□□□□ -0.37
TSPAN4O14817 SLC25A6P2-201ENST00000497974 877 ntBASIC12.77□□□□□ -0.37
TSPAN4O14817 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.77□□□□□ -0.37
TSPAN4O14817 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.77□□□□□ -0.37
TSPAN4O14817 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.77□□□□□ -0.37
TSPAN4O14817 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.77□□□□□ -0.37
TSPAN4O14817 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.77□□□□□ -0.37
TSPAN4O14817 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
TSPAN4O14817 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.77□□□□□ -0.37
TSPAN4O14817 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TSPAN4O14817 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TSPAN4O14817 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TSPAN4O14817 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.77□□□□□ -0.37
TSPAN4O14817 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TSPAN4O14817 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TSPAN4O14817 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TSPAN4O14817 TOP3BP1-201ENST00000420768 1380 ntBASIC12.77□□□□□ -0.37
TSPAN4O14817 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TSPAN4O14817 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TSPAN4O14817 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TSPAN4O14817 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.77□□□□□ -0.37
TSPAN4O14817 KRT8P49-201ENST00000604166 1432 ntBASIC12.77□□□□□ -0.37
TSPAN4O14817 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms