Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SOX1O00570 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.7■□□□□ 0.1
SOX1O00570 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX1O00570 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX1O00570 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX1O00570 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SOX1O00570 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.7■□□□□ 0.1
SOX1O00570 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SOX1O00570 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.7■□□□□ 0.1
SOX1O00570 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
SOX1O00570 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX1O00570 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX1O00570 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX1O00570 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SOX1O00570 AL157823.1-201ENST00000403727 628 ntBASIC15.7■□□□□ 0.1
SOX1O00570 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC15.7■□□□□ 0.1
SOX1O00570 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SOX1O00570 AC092896.1-201ENST00000465850 380 ntBASIC15.7■□□□□ 0.1
SOX1O00570 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC15.7■□□□□ 0.1
SOX1O00570 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.7■□□□□ 0.1
SOX1O00570 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.7■□□□□ 0.1
SOX1O00570 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC15.7■□□□□ 0.1
SOX1O00570 AC013553.1-201ENST00000560906 267 ntBASIC15.7■□□□□ 0.1
SOX1O00570 AC120498.5-201ENST00000561757 299 ntBASIC15.7■□□□□ 0.1
SOX1O00570 INO80E-209ENST00000567254 625 ntTSL 2 BASIC15.7■□□□□ 0.1
SOX1O00570 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SOX1O00570 MIR4254-201ENST00000581063 76 ntBASIC15.7■□□□□ 0.1
SOX1O00570 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.7■□□□□ 0.1
SOX1O00570 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.7■□□□□ 0.1
SOX1O00570 AC020904.3-201ENST00000624199 442 ntBASIC15.7■□□□□ 0.1
SOX1O00570 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX1O00570 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX1O00570 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SOX1O00570 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SOX1O00570 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX1O00570 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX1O00570 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.7■□□□□ 0.1
SOX1O00570 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
SOX1O00570 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.69■□□□□ 0.1
SOX1O00570 AC106886.4-201ENST00000623557 2502 ntBASIC15.69■□□□□ 0.1
SOX1O00570 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SOX1O00570 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX1O00570 AC006372.4-201ENST00000624122 1543 ntBASIC15.69■□□□□ 0.1
SOX1O00570 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SOX1O00570 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
SOX1O00570 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SOX1O00570 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX1O00570 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SOX1O00570 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SOX1O00570 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX1O00570 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.69■□□□□ 0.1
SOX1O00570 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX1O00570 SNORA57-201ENST00000383870 149 ntBASIC15.69■□□□□ 0.1
SOX1O00570 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC15.69■□□□□ 0.1
SOX1O00570 CDCA4P4-201ENST00000435216 680 ntBASIC15.69■□□□□ 0.1
SOX1O00570 RN7SL530P-201ENST00000485097 298 ntBASIC15.69■□□□□ 0.1
SOX1O00570 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC15.69■□□□□ 0.1
SOX1O00570 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC15.69■□□□□ 0.1
SOX1O00570 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SOX1O00570 AC131206.1-201ENST00000538078 1211 ntBASIC15.69■□□□□ 0.1
SOX1O00570 AC078814.4-201ENST00000546650 327 ntBASIC15.69■□□□□ 0.1
SOX1O00570 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX1O00570 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC15.69■□□□□ 0.1
SOX1O00570 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX1O00570 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC15.69■□□□□ 0.1
SOX1O00570 NEK4P3-201ENST00000604859 544 ntBASIC15.69■□□□□ 0.1
SOX1O00570 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SOX1O00570 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC15.69■□□□□ 0.1
SOX1O00570 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SOX1O00570 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.69■□□□□ 0.1
SOX1O00570 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX1O00570 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
SOX1O00570 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX1O00570 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX1O00570 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX1O00570 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX1O00570 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX1O00570 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SOX1O00570 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SOX1O00570 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX1O00570 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
SOX1O00570 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.68■□□□□ 0.1
SOX1O00570 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.68■□□□□ 0.1
SOX1O00570 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SOX1O00570 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.68■□□□□ 0.1
SOX1O00570 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.68■□□□□ 0.1
SOX1O00570 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX1O00570 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.68■□□□□ 0.1
SOX1O00570 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX1O00570 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
SOX1O00570 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.68■□□□□ 0.1
SOX1O00570 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX1O00570 AL136172.1-201ENST00000598590 1394 ntBASIC15.68■□□□□ 0.1
SOX1O00570 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX1O00570 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX1O00570 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
SOX1O00570 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SOX1O00570 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.68■□□□□ 0.1
SOX1O00570 PGAM1P11-201ENST00000416729 680 ntBASIC15.68■□□□□ 0.1
SOX1O00570 AC073869.2-201ENST00000417338 1026 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms