Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCRL2O00421 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CCRL2O00421 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCRL2O00421 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCRL2O00421 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.63□□□□□ -0.23
CCRL2O00421 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CCRL2O00421 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCRL2O00421 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCRL2O00421 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.63□□□□□ -0.23
CCRL2O00421 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCRL2O00421 AC104457.1-201ENST00000401024 814 ntBASIC13.63□□□□□ -0.23
CCRL2O00421 AL590627.1-203ENST00000421194 1026 ntBASIC13.63□□□□□ -0.23
CCRL2O00421 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CCRL2O00421 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.63□□□□□ -0.23
CCRL2O00421 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.63□□□□□ -0.23
CCRL2O00421 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.63□□□□□ -0.23
CCRL2O00421 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.63□□□□□ -0.23
CCRL2O00421 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.63□□□□□ -0.23
CCRL2O00421 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.63□□□□□ -0.23
CCRL2O00421 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.63□□□□□ -0.23
CCRL2O00421 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCRL2O00421 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCRL2O00421 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCRL2O00421 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCRL2O00421 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCRL2O00421 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCRL2O00421 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CCRL2O00421 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CCRL2O00421 AC104109.2-201ENST00000602919 1418 ntBASIC13.63□□□□□ -0.23
CCRL2O00421 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCRL2O00421 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CCRL2O00421 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCRL2O00421 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCRL2O00421 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.63□□□□□ -0.23
CCRL2O00421 AC004899.2-201ENST00000622993 3860 ntBASIC13.63□□□□□ -0.23
CCRL2O00421 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCRL2O00421 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CCRL2O00421 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCRL2O00421 AL354702.1-201ENST00000442006 1960 ntBASIC13.62□□□□□ -0.23
CCRL2O00421 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 INE2-201ENST00000630399 1874 ntBASIC13.62□□□□□ -0.23
CCRL2O00421 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.62□□□□□ -0.23
CCRL2O00421 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.62□□□□□ -0.23
CCRL2O00421 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.62□□□□□ -0.23
CCRL2O00421 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.62□□□□□ -0.23
CCRL2O00421 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.62□□□□□ -0.23
CCRL2O00421 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.62□□□□□ -0.23
CCRL2O00421 RPL13AP23-201ENST00000480739 586 ntBASIC13.62□□□□□ -0.23
CCRL2O00421 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CCRL2O00421 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.62□□□□□ -0.23
CCRL2O00421 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CCRL2O00421 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.62□□□□□ -0.23
CCRL2O00421 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.62□□□□□ -0.23
CCRL2O00421 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.62□□□□□ -0.23
CCRL2O00421 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCRL2O00421 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
CCRL2O00421 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.62□□□□□ -0.23
CCRL2O00421 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.62□□□□□ -0.23
CCRL2O00421 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.62□□□□□ -0.23
CCRL2O00421 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.62□□□□□ -0.23
CCRL2O00421 IL9RP2-201ENST00000423948 1312 ntBASIC13.62□□□□□ -0.23
CCRL2O00421 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCRL2O00421 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.62□□□□□ -0.23
CCRL2O00421 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.62□□□□□ -0.23
CCRL2O00421 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCRL2O00421 CES1P1-201ENST00000421606 1704 ntBASIC13.61□□□□□ -0.23
CCRL2O00421 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCRL2O00421 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCRL2O00421 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCRL2O00421 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CCRL2O00421 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCRL2O00421 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CCRL2O00421 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCRL2O00421 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.61□□□□□ -0.23
CCRL2O00421 ZNF259P1-201ENST00000407656 1365 ntBASIC13.61□□□□□ -0.23
CCRL2O00421 LILRP1-201ENST00000444199 1370 ntBASIC13.61□□□□□ -0.23
CCRL2O00421 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.61□□□□□ -0.23
CCRL2O00421 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.61□□□□□ -0.23
CCRL2O00421 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CCRL2O00421 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CCRL2O00421 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms