Protein–RNA interactions for Protein: A8MYP8

ODF3B, Outer dense fiber protein 3B, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3BA8MYP8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
ODF3BA8MYP8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ODF3BA8MYP8 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.05□□□□□ -0.48
ODF3BA8MYP8 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
ODF3BA8MYP8 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 SHC1P1-201ENST00000425230 1745 ntBASIC12.04□□□□□ -0.48
ODF3BA8MYP8 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 HSPB1P2-201ENST00000448722 546 ntBASIC12.04□□□□□ -0.48
ODF3BA8MYP8 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 RPSAP36-202ENST00000494591 1261 ntBASIC12.04□□□□□ -0.48
ODF3BA8MYP8 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
ODF3BA8MYP8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 MIR326-201ENST00000362220 95 ntBASIC12.03□□□□□ -0.48
ODF3BA8MYP8 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 AC007274.1-201ENST00000439805 662 ntBASIC12.03□□□□□ -0.48
ODF3BA8MYP8 GOLGA2P4-201ENST00000441462 777 ntBASIC12.03□□□□□ -0.48
ODF3BA8MYP8 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 AC100850.1-201ENST00000506768 649 ntBASIC12.03□□□□□ -0.48
ODF3BA8MYP8 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 AL590440.2-201ENST00000641973 1595 ntBASIC12.03□□□□□ -0.48
ODF3BA8MYP8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ODF3BA8MYP8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms