Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.13□□□□□ -0.31
HMX3A6NHT5 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMX3A6NHT5 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 AC004899.2-201ENST00000622993 3860 ntBASIC13.12□□□□□ -0.31
HMX3A6NHT5 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 AC090505.1-201ENST00000430515 1834 ntBASIC13.12□□□□□ -0.31
HMX3A6NHT5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 HCG4B-203ENST00000450128 991 ntBASIC13.12□□□□□ -0.31
HMX3A6NHT5 AL031432.2-201ENST00000566714 459 ntBASIC13.12□□□□□ -0.31
HMX3A6NHT5 AL928711.1-201ENST00000570165 459 ntBASIC13.12□□□□□ -0.31
HMX3A6NHT5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 AL031055.1-201ENST00000606362 631 ntBASIC13.12□□□□□ -0.31
HMX3A6NHT5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.12□□□□□ -0.31
HMX3A6NHT5 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMX3A6NHT5 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
HMX3A6NHT5 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.11□□□□□ -0.31
HMX3A6NHT5 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.11□□□□□ -0.31
HMX3A6NHT5 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.11□□□□□ -0.31
HMX3A6NHT5 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
HMX3A6NHT5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 RNU1-129P-201ENST00000384064 167 ntBASIC13.11□□□□□ -0.31
HMX3A6NHT5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
HMX3A6NHT5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.11□□□□□ -0.31
HMX3A6NHT5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.11□□□□□ -0.31
HMX3A6NHT5 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.11□□□□□ -0.31
HMX3A6NHT5 U1.21-201ENST00000580816 167 ntBASIC13.11□□□□□ -0.31
HMX3A6NHT5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.11□□□□□ -0.31
HMX3A6NHT5 AL121894.2-201ENST00000602977 491 ntBASIC13.11□□□□□ -0.31
HMX3A6NHT5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.11□□□□□ -0.31
HMX3A6NHT5 Z83851.2-201ENST00000609564 659 ntBASIC13.11□□□□□ -0.31
HMX3A6NHT5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 AC010507.1-201ENST00000633895 436 ntBASIC13.11□□□□□ -0.31
HMX3A6NHT5 TCAM1P-207ENST00000485295 1537 ntBASIC13.11□□□□□ -0.31
HMX3A6NHT5 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.11□□□□□ -0.31
HMX3A6NHT5 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
HMX3A6NHT5 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.11□□□□□ -0.31
HMX3A6NHT5 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
HMX3A6NHT5 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
HMX3A6NHT5 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HMX3A6NHT5 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms