Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1G3Q9Y6M4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1G3Q9Y6M4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CSNK1G3Q9Y6M4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1G3Q9Y6M4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.74□□□□□ -0.05
CSNK1G3Q9Y6M4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1G3Q9Y6M4 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1G3Q9Y6M4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1G3Q9Y6M4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1G3Q9Y6M4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1G3Q9Y6M4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1G3Q9Y6M4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 FKBP4P6-201ENST00000457486 1332 ntBASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 EIF4HP1-201ENST00000453115 687 ntBASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 HIST2H2BC-201ENST00000498492 580 ntBASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 AC026434.2-201ENST00000506094 1078 ntBASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 RHOQP1-201ENST00000555758 579 ntBASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 MIR3619-201ENST00000579667 83 ntBASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 AC105250.1-201ENST00000509378 2057 ntBASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 REXO1L5P-201ENST00000622260 2098 ntBASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 AC068587.6-202ENST00000641839 5619 ntBASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 KRT8P29-201ENST00000420409 1371 ntBASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.73□□□□□ -0.05
CSNK1G3Q9Y6M4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 AC016700.1-201ENST00000429424 312 ntBASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 AC004466.1-201ENST00000599515 1080 ntBASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1G3Q9Y6M4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms