Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.36■□□□□ 0.05
EBF1Q9UH73 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.36■□□□□ 0.05
EBF1Q9UH73 NKAIN1P1-201ENST00000435754 582 ntBASIC15.36■□□□□ 0.05
EBF1Q9UH73 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
EBF1Q9UH73 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.36■□□□□ 0.05
EBF1Q9UH73 PPY2P-201ENST00000582808 702 ntBASIC15.36■□□□□ 0.05
EBF1Q9UH73 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
EBF1Q9UH73 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.36■□□□□ 0.05
EBF1Q9UH73 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.36■□□□□ 0.05
EBF1Q9UH73 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
EBF1Q9UH73 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
EBF1Q9UH73 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.36■□□□□ 0.05
EBF1Q9UH73 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
EBF1Q9UH73 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.36■□□□□ 0.05
EBF1Q9UH73 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
EBF1Q9UH73 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
EBF1Q9UH73 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.36■□□□□ 0.05
EBF1Q9UH73 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
EBF1Q9UH73 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.36■□□□□ 0.05
EBF1Q9UH73 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
EBF1Q9UH73 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
EBF1Q9UH73 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
EBF1Q9UH73 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
EBF1Q9UH73 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.36■□□□□ 0.05
EBF1Q9UH73 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 AP003680.1-201ENST00000598970 3660 ntBASIC15.35■□□□□ 0.05
EBF1Q9UH73 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 CYP46A4P-201ENST00000414953 267 ntBASIC15.35■□□□□ 0.05
EBF1Q9UH73 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 HINT2P1-201ENST00000419438 481 ntBASIC15.35■□□□□ 0.05
EBF1Q9UH73 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 AC044849.1-201ENST00000519737 1188 ntBASIC15.35■□□□□ 0.05
EBF1Q9UH73 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.35■□□□□ 0.05
EBF1Q9UH73 AC005089.1-201ENST00000619486 2241 ntBASIC15.35■□□□□ 0.05
EBF1Q9UH73 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
EBF1Q9UH73 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBF1Q9UH73 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.34■□□□□ 0.05
EBF1Q9UH73 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBF1Q9UH73 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.34■□□□□ 0.05
EBF1Q9UH73 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
EBF1Q9UH73 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.34■□□□□ 0.05
EBF1Q9UH73 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
EBF1Q9UH73 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBF1Q9UH73 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.34■□□□□ 0.05
EBF1Q9UH73 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.34■□□□□ 0.05
EBF1Q9UH73 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
EBF1Q9UH73 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.34■□□□□ 0.05
EBF1Q9UH73 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBF1Q9UH73 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
EBF1Q9UH73 AC084364.1-201ENST00000551967 1556 ntBASIC15.34■□□□□ 0.05
EBF1Q9UH73 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
EBF1Q9UH73 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.34■□□□□ 0.05
EBF1Q9UH73 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
EBF1Q9UH73 FXNP2-201ENST00000411625 547 ntBASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms