Protein–RNA interactions for Protein: Q9P2E5

CHPF2, Chondroitin sulfate glucuronyltransferase, humanhuman

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2Q9P2E5 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 AJ011931.1-201ENST00000618749 2492 ntBASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHPF2Q9P2E5 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 DEF8-202ENST00000418391 852 ntTSL 2 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 CICP12-201ENST00000455801 843 ntBASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 AC008825.2-201ENST00000603374 718 ntBASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 AC138649.2-201ENST00000615886 705 ntBASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CHPF2Q9P2E5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 NPPA-201ENST00000376476 728 ntTSL 3 BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 PUDPP3-201ENST00000445368 636 ntBASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 EIF4HP1-201ENST00000453115 687 ntBASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 IGHJ2P-201ENST00000454480 60 ntBASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 TUBB8P8-201ENST00000458717 1058 ntBASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 RPL18P13-201ENST00000478088 569 ntBASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 AC005740.2-201ENST00000511085 419 ntBASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 SDHD-202ENST00000525291 790 ntTSL 3 BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 AC004923.1-202ENST00000642106 209 ntBASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.95■□□□□ 0.62
CHPF2Q9P2E5 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms