Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CUEDC1Q9NWM3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 LRRC59-203ENST00000576448 1531 ntBASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 AC092506.1-202ENST00000401022 528 ntBASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 EIF3FP3-201ENST00000434851 1086 ntBASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 AP001889.1-201ENST00000525414 633 ntBASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 MIR4538-201ENST00000581377 78 ntBASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 RN7SL219P-201ENST00000582872 296 ntBASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 AC103810.3-201ENST00000583567 96 ntBASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 MIR6869-201ENST00000619434 62 ntBASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.63□□□□□ -0.07
CUEDC1Q9NWM3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 SLC25A47P1-201ENST00000531577 414 ntBASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CUEDC1Q9NWM3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms