Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
VRK1Q99986 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.42□□□□□ -0.26
VRK1Q99986 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
VRK1Q99986 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
VRK1Q99986 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
VRK1Q99986 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK1Q99986 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.42□□□□□ -0.26
VRK1Q99986 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
VRK1Q99986 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
VRK1Q99986 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.42□□□□□ -0.26
VRK1Q99986 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
VRK1Q99986 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
VRK1Q99986 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK1Q99986 RPL13P2-201ENST00000440687 659 ntBASIC13.42□□□□□ -0.26
VRK1Q99986 ATP5G2P4-201ENST00000442175 420 ntBASIC13.42□□□□□ -0.26
VRK1Q99986 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.42□□□□□ -0.26
VRK1Q99986 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK1Q99986 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK1Q99986 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK1Q99986 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK1Q99986 SLED1-202ENST00000512051 380 ntBASIC13.42□□□□□ -0.26
VRK1Q99986 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.42□□□□□ -0.26
VRK1Q99986 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.42□□□□□ -0.26
VRK1Q99986 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.42□□□□□ -0.26
VRK1Q99986 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK1Q99986 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.42□□□□□ -0.26
VRK1Q99986 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.42□□□□□ -0.26
VRK1Q99986 AL158212.4-201ENST00000624062 1286 ntBASIC13.42□□□□□ -0.26
VRK1Q99986 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
VRK1Q99986 AGAP7P-201ENST00000582299 2062 ntBASIC13.42□□□□□ -0.26
VRK1Q99986 AGAP14-201ENST00000624701 2060 ntBASIC13.42□□□□□ -0.26
VRK1Q99986 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
VRK1Q99986 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.42□□□□□ -0.26
VRK1Q99986 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.42□□□□□ -0.26
VRK1Q99986 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK1Q99986 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
VRK1Q99986 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK1Q99986 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.42□□□□□ -0.26
VRK1Q99986 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
VRK1Q99986 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.42□□□□□ -0.26
VRK1Q99986 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
VRK1Q99986 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
VRK1Q99986 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
VRK1Q99986 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VRK1Q99986 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VRK1Q99986 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.41□□□□□ -0.26
VRK1Q99986 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.41□□□□□ -0.26
VRK1Q99986 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VRK1Q99986 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VRK1Q99986 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
VRK1Q99986 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.41□□□□□ -0.26
VRK1Q99986 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
VRK1Q99986 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.41□□□□□ -0.26
VRK1Q99986 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VRK1Q99986 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
VRK1Q99986 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
VRK1Q99986 AC074338.1-201ENST00000416825 156 ntBASIC13.41□□□□□ -0.26
VRK1Q99986 KRT18P64-201ENST00000434946 1219 ntBASIC13.41□□□□□ -0.26
VRK1Q99986 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.41□□□□□ -0.26
VRK1Q99986 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VRK1Q99986 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.41□□□□□ -0.26
VRK1Q99986 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.41□□□□□ -0.26
VRK1Q99986 FAM86LP-201ENST00000478302 853 ntBASIC13.41□□□□□ -0.26
VRK1Q99986 IGHV3-71-201ENST00000523324 359 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms