Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 AC010327.4-202ENST00000591484 748 ntBASIC13.44□□□□□ -0.26
RFT1Q96AA3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 AL513210.1-201ENST00000629608 234 ntBASIC13.44□□□□□ -0.26
RFT1Q96AA3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 AC027612.1-201ENST00000445234 2395 ntBASIC13.44□□□□□ -0.26
RFT1Q96AA3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.44□□□□□ -0.26
RFT1Q96AA3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RFT1Q96AA3 PEG13-201ENST00000631594 5667 ntBASIC13.44□□□□□ -0.26
RFT1Q96AA3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 DMBT1P1-203ENST00000636837 4628 ntBASIC13.43□□□□□ -0.26
RFT1Q96AA3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.43□□□□□ -0.26
RFT1Q96AA3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 AP000347.1-202ENST00000435868 847 ntBASIC13.43□□□□□ -0.26
RFT1Q96AA3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.43□□□□□ -0.26
RFT1Q96AA3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RFT1Q96AA3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RFT1Q96AA3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 PPT1-213ENST00000641319 2388 ntBASIC13.42□□□□□ -0.26
RFT1Q96AA3 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RFT1Q96AA3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.42□□□□□ -0.26
RFT1Q96AA3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms