Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SNX21Q969T3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 DGCR9-201ENST00000609630 2415 ntBASIC17.8■□□□□ 0.44
SNX21Q969T3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC17.8■□□□□ 0.44
SNX21Q969T3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 NUS1P3-201ENST00000423502 862 ntBASIC17.8■□□□□ 0.44
SNX21Q969T3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SNX21Q969T3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.8■□□□□ 0.44
SNX21Q969T3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SNX21Q969T3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.8■□□□□ 0.44
SNX21Q969T3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SNX21Q969T3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.8■□□□□ 0.44
SNX21Q969T3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
SNX21Q969T3 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.8■□□□□ 0.44
SNX21Q969T3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNX21Q969T3 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX21Q969T3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SNX21Q969T3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SNX21Q969T3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SNX21Q969T3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SNX21Q969T3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX21Q969T3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX21Q969T3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.79■□□□□ 0.44
SNX21Q969T3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX21Q969T3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.79■□□□□ 0.44
SNX21Q969T3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.79■□□□□ 0.44
SNX21Q969T3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX21Q969T3 AL596442.2-201ENST00000610240 980 ntBASIC17.79■□□□□ 0.44
SNX21Q969T3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.79■□□□□ 0.44
SNX21Q969T3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SNX21Q969T3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC17.79■□□□□ 0.44
SNX21Q969T3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SNX21Q969T3 AC027612.1-201ENST00000445234 2395 ntBASIC17.79■□□□□ 0.44
SNX21Q969T3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX21Q969T3 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SNX21Q969T3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SNX21Q969T3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC17.79■□□□□ 0.44
SNX21Q969T3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX21Q969T3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX21Q969T3 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SNX21Q969T3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX21Q969T3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.78■□□□□ 0.44
SNX21Q969T3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
SNX21Q969T3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.78■□□□□ 0.44
SNX21Q969T3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SNX21Q969T3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX21Q969T3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX21Q969T3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX21Q969T3 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX21Q969T3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX21Q969T3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX21Q969T3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX21Q969T3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.78■□□□□ 0.44
SNX21Q969T3 TLE1P1-201ENST00000422965 589 ntBASIC17.78■□□□□ 0.44
SNX21Q969T3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.78■□□□□ 0.44
SNX21Q969T3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.78■□□□□ 0.44
SNX21Q969T3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.78■□□□□ 0.44
SNX21Q969T3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX21Q969T3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.78■□□□□ 0.44
SNX21Q969T3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.78■□□□□ 0.44
SNX21Q969T3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX21Q969T3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms