Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 MTND6P11-201ENST00000431890 483 ntBASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 AL358115.1-202ENST00000455257 675 ntTSL 3 BASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 PRAMEF35P-201ENST00000458709 891 ntBASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 TMEM161B-AS1-204ENST00000504636 1039 ntTSL 2 BASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 AC004080.4-201ENST00000602610 633 ntBASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
SYNE2Q8WXH0 AL513523.2-202ENST00000427283 2040 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 OR52M2P-201ENST00000414298 959 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 TXN2-204ENST00000416967 1280 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 KRT18P62-201ENST00000446618 1287 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AL136084.1-201ENST00000449172 318 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 RN7SL2-201ENST00000490232 300 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 GOLGA2P8-201ENST00000505201 779 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 DUX4L47-201ENST00000566374 394 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 RN7SL4P-201ENST00000584058 295 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AC022382.1-201ENST00000602768 336 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AC116036.2-201ENST00000607592 462 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 ESR1-214ENST00000638569 132 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AC098818.2-201ENST00000564925 2320 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 HBD-202ENST00000380299 785 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 SRP9P1-201ENST00000445874 261 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 RN7SL211P-201ENST00000485246 276 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AC007992.1-201ENST00000513953 953 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AC103702.1-201ENST00000548801 2630 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 MED11-203ENST00000575284 652 ntTSL 3 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AC138696.2-201ENST00000607376 223 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 LINC01144-201ENST00000626198 1710 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 KRTAP20-2-201ENST00000330798 384 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 RPL29P2-202ENST00000498671 657 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AC023983.1-201ENST00000579347 567 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 AC006058.4-201ENST00000624016 1670 ntBASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SYNE2Q8WXH0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms