Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.4■□□□□ 0.06
PTCD2Q8WV60 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTCD2Q8WV60 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTCD2Q8WV60 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTCD2Q8WV60 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.4■□□□□ 0.06
PTCD2Q8WV60 AC232323.1-201ENST00000540724 2099 ntBASIC15.4■□□□□ 0.06
PTCD2Q8WV60 REXO1L5P-201ENST00000622260 2098 ntBASIC15.4■□□□□ 0.06
PTCD2Q8WV60 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTCD2Q8WV60 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTCD2Q8WV60 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTCD2Q8WV60 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTCD2Q8WV60 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PTCD2Q8WV60 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTCD2Q8WV60 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTCD2Q8WV60 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTCD2Q8WV60 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTCD2Q8WV60 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.4■□□□□ 0.06
PTCD2Q8WV60 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTCD2Q8WV60 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.39■□□□□ 0.05
PTCD2Q8WV60 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 RNU6-673P-201ENST00000365084 104 ntBASIC15.39■□□□□ 0.05
PTCD2Q8WV60 AC079776.1-201ENST00000401540 1152 ntBASIC15.39■□□□□ 0.05
PTCD2Q8WV60 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 TTTY23B-201ENST00000442790 549 ntBASIC15.39■□□□□ 0.05
PTCD2Q8WV60 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 HILS1-202ENST00000545329 423 ntBASIC15.39■□□□□ 0.05
PTCD2Q8WV60 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 AC010319.3-201ENST00000597028 470 ntBASIC15.39■□□□□ 0.05
PTCD2Q8WV60 AC106795.5-201ENST00000623288 454 ntBASIC15.39■□□□□ 0.05
PTCD2Q8WV60 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.39■□□□□ 0.05
PTCD2Q8WV60 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTCD2Q8WV60 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 INTS4P2-202ENST00000614726 2019 ntBASIC15.38■□□□□ 0.05
PTCD2Q8WV60 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 AL442647.2-201ENST00000429864 857 ntBASIC15.38■□□□□ 0.05
PTCD2Q8WV60 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.38■□□□□ 0.05
PTCD2Q8WV60 AC011495.1-201ENST00000498085 584 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms