Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 KRT18P57-201ENST00000443599 1254 ntBASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 CXCL1P1-201ENST00000502804 216 ntBASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 AC098859.1-201ENST00000502915 1238 ntBASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 KRT18P21-201ENST00000515767 1272 ntBASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 VENTXP1-201ENST00000569334 2716 ntBASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
BCAS4Q8TDM0 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 AC018665.1-201ENST00000622927 1362 ntBASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 AC073621.1-201ENST00000392730 636 ntBASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 KRT18P27-201ENST00000427733 1299 ntBASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 AC136632.2-201ENST00000512891 861 ntBASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 AC022616.7-201ENST00000525383 220 ntBASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 PCDHA5-203ENST00000614258 4248 ntBASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 AGAP10P-201ENST00000454844 2418 ntBASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BCAS4Q8TDM0 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BCAS4Q8TDM0 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC15.15■□□□□ 0.02
BCAS4Q8TDM0 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC15.15■□□□□ 0.02
BCAS4Q8TDM0 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
BCAS4Q8TDM0 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
BCAS4Q8TDM0 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BCAS4Q8TDM0 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
BCAS4Q8TDM0 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BCAS4Q8TDM0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BCAS4Q8TDM0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.15■□□□□ 0.02
BCAS4Q8TDM0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BCAS4Q8TDM0 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BCAS4Q8TDM0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BCAS4Q8TDM0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms