Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 FTLP10-202ENST00000505798 471 ntBASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 AC026434.2-201ENST00000506094 1078 ntBASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 AC005730.2-201ENST00000564549 1184 ntBASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 AC007663.3-201ENST00000609632 465 ntBASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHKBP1Q8TBC3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 AL360270.3-201ENST00000609118 1348 ntBASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 MESTP3-201ENST00000503460 968 ntBASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 AC100850.1-201ENST00000506768 649 ntBASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 RHOQP1-201ENST00000555758 579 ntBASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 CICP11-201ENST00000434745 2827 ntBASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHKBP1Q8TBC3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 AL136309.1-201ENST00000403917 691 ntBASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SHKBP1Q8TBC3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms