Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH19Q8TAB3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH19Q8TAB3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH19Q8TAB3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH19Q8TAB3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PCDH19Q8TAB3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 AL354702.1-201ENST00000442006 1960 ntBASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 AC063926.3-201ENST00000624734 5658 ntBASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDH19Q8TAB3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 BX640514.1-201ENST00000583223 1918 ntBASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 ACTG1P3-201ENST00000431775 1114 ntBASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 MIR5189-201ENST00000577370 114 ntBASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 AC015656.1-201ENST00000624209 3578 ntBASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDH19Q8TAB3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDH19Q8TAB3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms