Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 AL139400.1-201ENST00000366220 510 ntBASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 AL133267.1-201ENST00000398220 340 ntBASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 AC104457.1-201ENST00000401024 814 ntBASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 MTND6P24-201ENST00000440466 518 ntBASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 AC067863.1-201ENST00000494933 530 ntBASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 Z97205.2-201ENST00000564697 1639 ntBASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 AC027612.1-201ENST00000445234 2395 ntBASIC14.22□□□□□ -0.13
PIK3C3Q8NEB9 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 KRT18P28-201ENST00000453838 1332 ntBASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 AL079307.3-201ENST00000556114 283 ntBASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 Z92544.3-201ENST00000624747 417 ntBASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.21□□□□□ -0.13
PIK3C3Q8NEB9 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
PIK3C3Q8NEB9 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.21□□□□□ -0.14
PIK3C3Q8NEB9 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PIK3C3Q8NEB9 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
PIK3C3Q8NEB9 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PIK3C3Q8NEB9 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PIK3C3Q8NEB9 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.21□□□□□ -0.14
PIK3C3Q8NEB9 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PIK3C3Q8NEB9 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
PIK3C3Q8NEB9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
PIK3C3Q8NEB9 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PIK3C3Q8NEB9 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
PIK3C3Q8NEB9 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PIK3C3Q8NEB9 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms