Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 AL135901.1-201ENST00000451812 333 ntBASIC17.82■□□□□ 0.44
SLX4Q8IY92 AREG-202ENST00000502307 956 ntTSL 5 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 RPS5-204ENST00000598098 536 ntTSL 2 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 AC010976.2-201ENST00000609697 852 ntBASIC17.82■□□□□ 0.44
SLX4Q8IY92 HMGB1P24-201ENST00000611897 328 ntBASIC17.82■□□□□ 0.44
SLX4Q8IY92 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 AC126365.1-201ENST00000578585 1514 ntBASIC17.82■□□□□ 0.44
SLX4Q8IY92 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 AL365203.3-201ENST00000609742 2057 ntBASIC17.82■□□□□ 0.44
SLX4Q8IY92 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 CSNK1G2P1-201ENST00000442675 955 ntBASIC17.82■□□□□ 0.44
SLX4Q8IY92 DDX39AP1-201ENST00000445147 1181 ntBASIC17.82■□□□□ 0.44
SLX4Q8IY92 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 AC095040.1-201ENST00000513286 675 ntBASIC17.82■□□□□ 0.44
SLX4Q8IY92 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 NAA40-205ENST00000539656 577 ntTSL 4 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLX4Q8IY92 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.82■□□□□ 0.44
SLX4Q8IY92 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLX4Q8IY92 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SLX4Q8IY92 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.81■□□□□ 0.44
SLX4Q8IY92 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
SLX4Q8IY92 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLX4Q8IY92 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.81■□□□□ 0.44
SLX4Q8IY92 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLX4Q8IY92 AL591122.2-201ENST00000624125 1853 ntBASIC17.81■□□□□ 0.44
SLX4Q8IY92 AC092135.3-201ENST00000624151 1846 ntBASIC17.81■□□□□ 0.44
SLX4Q8IY92 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SLX4Q8IY92 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLX4Q8IY92 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLX4Q8IY92 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLX4Q8IY92 AL136172.1-201ENST00000598590 1394 ntBASIC17.81■□□□□ 0.44
SLX4Q8IY92 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SLX4Q8IY92 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SLX4Q8IY92 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLX4Q8IY92 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.81■□□□□ 0.44
SLX4Q8IY92 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC17.81■□□□□ 0.44
SLX4Q8IY92 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLX4Q8IY92 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC17.81■□□□□ 0.44
SLX4Q8IY92 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC17.81■□□□□ 0.44
SLX4Q8IY92 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC17.81■□□□□ 0.44
SLX4Q8IY92 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SLX4Q8IY92 TRMT112P3-201ENST00000580149 358 ntBASIC17.81■□□□□ 0.44
SLX4Q8IY92 AC055811.3-201ENST00000584952 686 ntBASIC17.81■□□□□ 0.44
SLX4Q8IY92 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
SLX4Q8IY92 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLX4Q8IY92 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.81■□□□□ 0.44
SLX4Q8IY92 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.81■□□□□ 0.44
SLX4Q8IY92 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLX4Q8IY92 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC17.8■□□□□ 0.44
SLX4Q8IY92 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.8■□□□□ 0.44
SLX4Q8IY92 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC17.8■□□□□ 0.44
SLX4Q8IY92 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLX4Q8IY92 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLX4Q8IY92 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLX4Q8IY92 AC106047.2-201ENST00000511723 743 ntBASIC17.8■□□□□ 0.44
SLX4Q8IY92 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC17.8■□□□□ 0.44
SLX4Q8IY92 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.8■□□□□ 0.44
SLX4Q8IY92 HELLS-212ENST00000630929 400 ntTSL 5 BASIC17.8■□□□□ 0.44
SLX4Q8IY92 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC17.8■□□□□ 0.44
SLX4Q8IY92 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.8■□□□□ 0.44
SLX4Q8IY92 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLX4Q8IY92 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLX4Q8IY92 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms