Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB43Q86YS6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB43Q86YS6 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB43Q86YS6 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
RAB43Q86YS6 AC087386.2-201ENST00000623212 4637 ntBASIC14.5□□□□□ -0.09
RAB43Q86YS6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB43Q86YS6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB43Q86YS6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
RAB43Q86YS6 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB43Q86YS6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB43Q86YS6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RAB43Q86YS6 AC112504.1-201ENST00000623415 1841 ntBASIC14.5□□□□□ -0.09
RAB43Q86YS6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB43Q86YS6 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
RAB43Q86YS6 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RAB43Q86YS6 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB43Q86YS6 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB43Q86YS6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RAB43Q86YS6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RAB43Q86YS6 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
RAB43Q86YS6 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.49□□□□□ -0.09
RAB43Q86YS6 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 ACTBP11-201ENST00000436287 1126 ntBASIC14.49□□□□□ -0.09
RAB43Q86YS6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB43Q86YS6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.49□□□□□ -0.09
RAB43Q86YS6 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB43Q86YS6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.49□□□□□ -0.09
RAB43Q86YS6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.49□□□□□ -0.09
RAB43Q86YS6 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.49□□□□□ -0.09
RAB43Q86YS6 AC010328.2-201ENST00000597698 1111 ntBASIC14.49□□□□□ -0.09
RAB43Q86YS6 BX539320.1-201ENST00000623759 877 ntBASIC14.49□□□□□ -0.09
RAB43Q86YS6 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RAB43Q86YS6 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RAB43Q86YS6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB43Q86YS6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB43Q86YS6 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
RAB43Q86YS6 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RAB43Q86YS6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB43Q86YS6 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 LINC02447-202ENST00000501888 2146 ntBASIC14.48□□□□□ -0.09
RAB43Q86YS6 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB43Q86YS6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.48□□□□□ -0.09
RAB43Q86YS6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.48□□□□□ -0.09
RAB43Q86YS6 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.48□□□□□ -0.09
RAB43Q86YS6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
RAB43Q86YS6 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.48□□□□□ -0.09
RAB43Q86YS6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RAB43Q86YS6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.48□□□□□ -0.09
RAB43Q86YS6 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.48□□□□□ -0.09
RAB43Q86YS6 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.48□□□□□ -0.09
RAB43Q86YS6 MIR4313-201ENST00000580760 101 ntBASIC14.48□□□□□ -0.09
RAB43Q86YS6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.48□□□□□ -0.09
RAB43Q86YS6 MSTO2P-201ENST00000314835 1709 ntBASIC14.48□□□□□ -0.09
RAB43Q86YS6 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RAB43Q86YS6 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.48□□□□□ -0.09
RAB43Q86YS6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
RAB43Q86YS6 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RAB43Q86YS6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAB43Q86YS6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.47□□□□□ -0.09
RAB43Q86YS6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB43Q86YS6 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAB43Q86YS6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB43Q86YS6 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms