Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
PPP4R4Q6NUP7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 AC089987.1-201ENST00000551654 2209 ntBASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 AC073957.3-201ENST00000609998 6758 ntBASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 AC004987.2-201ENST00000395959 1148 ntBASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 AC027369.6-201ENST00000525520 931 ntBASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 AC140878.1-201ENST00000565277 250 ntBASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 AL589739.1-201ENST00000607720 493 ntBASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 CICP11-201ENST00000434745 2827 ntBASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 CICP20-201ENST00000443330 2801 ntBASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
PPP4R4Q6NUP7 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 MST1P2-201ENST00000457982 2291 ntBASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 AC087386.2-201ENST00000623212 4637 ntBASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.53□□□□□ -0.08
PPP4R4Q6NUP7 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms