Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PGR-210ENST00000619228 3038 ntTSL 5 BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 AL591122.2-201ENST00000624125 1853 ntBASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 IGHV1-12-201ENST00000518307 205 ntBASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 C2orf69P1-201ENST00000563532 1093 ntBASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 AL133467.4-201ENST00000602953 725 ntBASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 AL591471.1-201ENST00000621855 229 ntBASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDC42BPAQ5VT25 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 RPL18AP8-201ENST00000486071 528 ntBASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 KLF17P1-201ENST00000547105 1126 ntBASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 AC011270.2-201ENST00000624293 2550 ntBASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDC42BPAQ5VT25 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 AC108734.2-201ENST00000420887 1069 ntBASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 PGAM1P12-201ENST00000505622 748 ntBASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 AC091951.1-201ENST00000512854 2465 ntBASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 LAP3P2-201ENST00000454686 1454 ntBASIC22.04■■□□□ 1.12
CDC42BPAQ5VT25 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 IDS-203ENST00000428056 1213 ntTSL 2 BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 AC140113.1-201ENST00000603467 169 ntBASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 MX1-218ENST00000619682 1980 ntTSL 5 BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 AC025183.3-201ENST00000623526 1482 ntBASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms