Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 AC107918.4-201ENST00000641966 3141 ntBASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 RBPMS2P1-201ENST00000437762 623 ntBASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 AC004066.1-201ENST00000502488 802 ntBASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 AL589739.1-201ENST00000607720 493 ntBASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC00242Q5T6M2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 AL080243.2-201ENST00000418783 582 ntBASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 SPDYE14P-201ENST00000442619 822 ntBASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 NMU-202ENST00000505262 693 ntTSL 3 BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC10.33□□□□□ -0.76
LINC00242Q5T6M2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms