Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 AC139749.1-202ENST00000617529 3139 ntBASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 AC004987.2-201ENST00000395959 1148 ntBASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 TMEM14DP-201ENST00000422205 345 ntBASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 ACTBP11-201ENST00000436287 1126 ntBASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 AC119751.2-201ENST00000504529 210 ntBASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 MIR4538-201ENST00000581377 78 ntBASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 CTBP2P3-201ENST00000585629 1255 ntBASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 MIR6787-201ENST00000616675 61 ntBASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 AL033527.5-202ENST00000641632 1098 ntBASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 AC007191.1-201ENST00000623179 2995 ntBASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CHRFAM7AQ494W8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 AC092933.1-201ENST00000393644 945 ntBASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 BRWD1P1-201ENST00000401091 371 ntBASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CHRFAM7AQ494W8 AC104596.2-201ENST00000512793 793 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms