Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 AC005562.1-201ENST00000583030 3219 ntBASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ANKRD55Q3KP44 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 AP3S2-216ENST00000617003 1561 ntBASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 KRT8P22-201ENST00000562317 1415 ntBASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 AL671277.1-201ENST00000429656 993 ntBASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 HTR5BP-201ENST00000430851 1154 ntBASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 TMEM198B-204ENST00000484016 896 ntBASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 AC010327.4-202ENST00000591484 748 ntBASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 AC092865.6-201ENST00000642101 219 ntBASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ANKRD55Q3KP44 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 AC090505.1-201ENST00000430515 1834 ntBASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 RPSAP43-201ENST00000402237 625 ntBASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 FO393414.2-201ENST00000405153 598 ntBASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 AC211486.1-202ENST00000416371 468 ntBASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 FAM58CP-201ENST00000435741 640 ntBASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 AC211476.1-201ENST00000503899 468 ntBASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ANKRD55Q3KP44 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms