Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 EIF3FP3-201ENST00000434851 1086 ntBASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 AC021723.1-201ENST00000486306 515 ntBASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 MIR4313-201ENST00000580760 101 ntBASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 AL353770.1-201ENST00000614915 403 ntBASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 AL805961.1-203ENST00000641078 1258 ntBASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 AC004923.1-202ENST00000642106 209 ntBASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CTC1Q2NKJ3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 AC006335.1-201ENST00000445200 547 ntBASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 AC106794.1-201ENST00000506935 792 ntBASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 AC106820.3-201ENST00000561653 397 ntBASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 RN7SL163P-201ENST00000583100 276 ntBASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 AC011491.1-203ENST00000637688 543 ntBASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 HLA-C-210ENST00000640219 976 ntBASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CTC1Q2NKJ3 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 AC007787.1-201ENST00000588095 1583 ntBASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 AL136309.1-201ENST00000403917 691 ntBASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 MARK2P5-201ENST00000507649 634 ntBASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CTC1Q2NKJ3 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms