Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LTBQ06643 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LTBQ06643 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.81□□□□□ -0.2
LTBQ06643 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
LTBQ06643 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.81□□□□□ -0.2
LTBQ06643 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
LTBQ06643 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LTBQ06643 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.81□□□□□ -0.2
LTBQ06643 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LTBQ06643 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 AC092506.1-202ENST00000401022 528 ntBASIC13.81□□□□□ -0.2
LTBQ06643 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.81□□□□□ -0.2
LTBQ06643 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.81□□□□□ -0.2
LTBQ06643 VDAC1P7-201ENST00000462417 847 ntBASIC13.81□□□□□ -0.2
LTBQ06643 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.81□□□□□ -0.2
LTBQ06643 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.81□□□□□ -0.2
LTBQ06643 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.81□□□□□ -0.2
LTBQ06643 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.81□□□□□ -0.2
LTBQ06643 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.81□□□□□ -0.2
LTBQ06643 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.81□□□□□ -0.2
LTBQ06643 RN7SL219P-201ENST00000582872 296 ntBASIC13.81□□□□□ -0.2
LTBQ06643 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.81□□□□□ -0.2
LTBQ06643 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.81□□□□□ -0.2
LTBQ06643 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.81□□□□□ -0.2
LTBQ06643 AL049840.4-201ENST00000602422 811 ntBASIC13.81□□□□□ -0.2
LTBQ06643 AC107373.2-201ENST00000607735 490 ntBASIC13.81□□□□□ -0.2
LTBQ06643 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.81□□□□□ -0.2
LTBQ06643 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.81□□□□□ -0.2
LTBQ06643 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
LTBQ06643 AL360270.3-201ENST00000609118 1348 ntBASIC13.81□□□□□ -0.2
LTBQ06643 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.81□□□□□ -0.2
LTBQ06643 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.81□□□□□ -0.2
LTBQ06643 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LTBQ06643 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LTBQ06643 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LTBQ06643 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
LTBQ06643 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
LTBQ06643 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.8□□□□□ -0.2
LTBQ06643 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.8□□□□□ -0.2
LTBQ06643 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LTBQ06643 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 AL138799.1-201ENST00000448213 1675 ntBASIC13.8□□□□□ -0.2
LTBQ06643 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
LTBQ06643 TTTY23B-201ENST00000442790 549 ntBASIC13.8□□□□□ -0.2
LTBQ06643 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.8□□□□□ -0.2
LTBQ06643 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.8□□□□□ -0.2
LTBQ06643 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.8□□□□□ -0.2
LTBQ06643 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.8□□□□□ -0.2
LTBQ06643 AC008494.3-201ENST00000606615 944 ntBASIC13.8□□□□□ -0.2
LTBQ06643 AC007191.1-201ENST00000623179 2995 ntBASIC13.8□□□□□ -0.2
LTBQ06643 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.8□□□□□ -0.2
LTBQ06643 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
LTBQ06643 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.8□□□□□ -0.2
LTBQ06643 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 AC093525.8-201ENST00000624099 1342 ntBASIC13.8□□□□□ -0.2
LTBQ06643 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 LILRP1-201ENST00000444199 1370 ntBASIC13.8□□□□□ -0.2
LTBQ06643 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LTBQ06643 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.8□□□□□ -0.2
LTBQ06643 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LTBQ06643 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.79□□□□□ -0.2
LTBQ06643 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LTBQ06643 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms