Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 ST20-AS1-201ENST00000560255 4223 ntBASIC10.8□□□□□ -0.68
UBE2D3P61077 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
UBE2D3P61077 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2D3P61077 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
UBE2D3P61077 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
UBE2D3P61077 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
UBE2D3P61077 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC10.8□□□□□ -0.68
UBE2D3P61077 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
UBE2D3P61077 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
UBE2D3P61077 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 AC005562.1-201ENST00000583030 3219 ntBASIC10.8□□□□□ -0.68
UBE2D3P61077 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2D3P61077 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2D3P61077 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 BAD-202ENST00000394531 631 ntTSL 3 BASIC10.8□□□□□ -0.68
UBE2D3P61077 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 KLF2P3-201ENST00000451977 1087 ntBASIC10.8□□□□□ -0.68
UBE2D3P61077 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC10.8□□□□□ -0.68
UBE2D3P61077 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC10.8□□□□□ -0.68
UBE2D3P61077 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC10.8□□□□□ -0.68
UBE2D3P61077 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC10.8□□□□□ -0.68
UBE2D3P61077 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2D3P61077 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
UBE2D3P61077 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC10.8□□□□□ -0.68
UBE2D3P61077 BAD-207ENST00000544785 525 ntTSL 3 BASIC10.8□□□□□ -0.68
UBE2D3P61077 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
UBE2D3P61077 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC10.8□□□□□ -0.68
UBE2D3P61077 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
UBE2D3P61077 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.8□□□□□ -0.68
UBE2D3P61077 AC025678.2-201ENST00000562061 970 ntBASIC10.8□□□□□ -0.68
UBE2D3P61077 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
UBE2D3P61077 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
UBE2D3P61077 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC10.8□□□□□ -0.68
UBE2D3P61077 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC10.8□□□□□ -0.68
UBE2D3P61077 AC000095.1-201ENST00000603208 874 ntBASIC10.8□□□□□ -0.68
UBE2D3P61077 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
UBE2D3P61077 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC10.8□□□□□ -0.68
UBE2D3P61077 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
UBE2D3P61077 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC10.8□□□□□ -0.68
UBE2D3P61077 DKFZP434A062-201ENST00000573103 5021 ntBASIC10.8□□□□□ -0.68
UBE2D3P61077 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 CES1P1-201ENST00000421606 1704 ntBASIC10.8□□□□□ -0.68
UBE2D3P61077 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
UBE2D3P61077 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC10.8□□□□□ -0.68
UBE2D3P61077 AC087499.5-201ENST00000452760 1342 ntBASIC10.8□□□□□ -0.68
UBE2D3P61077 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
UBE2D3P61077 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
UBE2D3P61077 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2D3P61077 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC10.8□□□□□ -0.68
UBE2D3P61077 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
UBE2D3P61077 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2D3P61077 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2D3P61077 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
UBE2D3P61077 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
UBE2D3P61077 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC10.79□□□□□ -0.68
UBE2D3P61077 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 AC007787.1-201ENST00000588095 1583 ntBASIC10.79□□□□□ -0.68
UBE2D3P61077 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
UBE2D3P61077 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2D3P61077 WRB-204ENST00000398753 699 ntTSL 3 BASIC10.79□□□□□ -0.68
UBE2D3P61077 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC10.79□□□□□ -0.68
UBE2D3P61077 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2D3P61077 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC10.79□□□□□ -0.68
UBE2D3P61077 DNAJB3-202ENST00000449667 1266 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms