Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.77□□□□□ -0.21
CXCR4P61073 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.77□□□□□ -0.21
CXCR4P61073 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCR4P61073 AC020658.7-201ENST00000624274 2442 ntBASIC13.76□□□□□ -0.21
CXCR4P61073 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CXCR4P61073 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCR4P61073 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCR4P61073 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCR4P61073 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCR4P61073 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCR4P61073 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CXCR4P61073 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CXCR4P61073 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.76□□□□□ -0.21
CXCR4P61073 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.76□□□□□ -0.21
CXCR4P61073 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CXCR4P61073 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCR4P61073 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CXCR4P61073 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CXCR4P61073 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCR4P61073 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.76□□□□□ -0.21
CXCR4P61073 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.76□□□□□ -0.21
CXCR4P61073 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CXCR4P61073 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.76□□□□□ -0.21
CXCR4P61073 SPDYE17-201ENST00000412399 783 ntBASIC13.76□□□□□ -0.21
CXCR4P61073 KRT18P32-201ENST00000424695 1287 ntBASIC13.76□□□□□ -0.21
CXCR4P61073 AC004832.2-201ENST00000426397 482 ntBASIC13.76□□□□□ -0.21
CXCR4P61073 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCR4P61073 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCR4P61073 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCR4P61073 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.76□□□□□ -0.21
CXCR4P61073 ALG1L5P-201ENST00000482043 771 ntBASIC13.76□□□□□ -0.21
CXCR4P61073 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.76□□□□□ -0.21
CXCR4P61073 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CXCR4P61073 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.76□□□□□ -0.21
CXCR4P61073 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
CXCR4P61073 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
CXCR4P61073 AC003101.2-201ENST00000612557 442 ntBASIC13.76□□□□□ -0.21
CXCR4P61073 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CXCR4P61073 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCR4P61073 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCR4P61073 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CXCR4P61073 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCR4P61073 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CXCR4P61073 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CXCR4P61073 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCR4P61073 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CXCR4P61073 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
CXCR4P61073 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCR4P61073 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCR4P61073 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
CXCR4P61073 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 AL360270.3-201ENST00000609118 1348 ntBASIC13.75□□□□□ -0.21
CXCR4P61073 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CXCR4P61073 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.75□□□□□ -0.21
CXCR4P61073 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CXCR4P61073 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.75□□□□□ -0.21
CXCR4P61073 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.75□□□□□ -0.21
CXCR4P61073 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.75□□□□□ -0.21
CXCR4P61073 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.75□□□□□ -0.21
CXCR4P61073 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.75□□□□□ -0.21
CXCR4P61073 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.75□□□□□ -0.21
CXCR4P61073 SLED1-202ENST00000512051 380 ntBASIC13.75□□□□□ -0.21
CXCR4P61073 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.75□□□□□ -0.21
CXCR4P61073 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.75□□□□□ -0.21
CXCR4P61073 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 AC022145.2-201ENST00000598203 171 ntBASIC13.75□□□□□ -0.21
CXCR4P61073 MTDHP5-201ENST00000598980 586 ntBASIC13.75□□□□□ -0.21
CXCR4P61073 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.75□□□□□ -0.21
CXCR4P61073 AC105339.1-204ENST00000636249 355 ntBASIC13.75□□□□□ -0.21
CXCR4P61073 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CXCR4P61073 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CXCR4P61073 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.75□□□□□ -0.21
CXCR4P61073 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.75□□□□□ -0.21
CXCR4P61073 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.75□□□□□ -0.21
CXCR4P61073 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCR4P61073 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.75□□□□□ -0.21
CXCR4P61073 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms