Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLRN1P58418 AL137783.1-201ENST00000623494 1896 ntBASIC13.52□□□□□ -0.25
CLRN1P58418 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLRN1P58418 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLRN1P58418 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLRN1P58418 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLRN1P58418 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CLRN1P58418 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CLRN1P58418 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.52□□□□□ -0.25
CLRN1P58418 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLRN1P58418 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLRN1P58418 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLRN1P58418 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CLRN1P58418 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLRN1P58418 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CLRN1P58418 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
CLRN1P58418 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.51□□□□□ -0.25
CLRN1P58418 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CLRN1P58418 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.51□□□□□ -0.25
CLRN1P58418 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.51□□□□□ -0.25
CLRN1P58418 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CLRN1P58418 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.51□□□□□ -0.25
CLRN1P58418 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
CLRN1P58418 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.51□□□□□ -0.25
CLRN1P58418 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.51□□□□□ -0.25
CLRN1P58418 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
CLRN1P58418 MIR661-201ENST00000384842 89 ntBASIC13.51□□□□□ -0.25
CLRN1P58418 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CLRN1P58418 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 AC098850.1-201ENST00000419919 790 ntBASIC13.51□□□□□ -0.25
CLRN1P58418 HLA-K-203ENST00000430151 1046 ntBASIC13.51□□□□□ -0.25
CLRN1P58418 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.51□□□□□ -0.25
CLRN1P58418 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.51□□□□□ -0.25
CLRN1P58418 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.51□□□□□ -0.25
CLRN1P58418 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.51□□□□□ -0.25
CLRN1P58418 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
CLRN1P58418 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.51□□□□□ -0.25
CLRN1P58418 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.51□□□□□ -0.25
CLRN1P58418 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CLRN1P58418 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
CLRN1P58418 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CLRN1P58418 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CLRN1P58418 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLRN1P58418 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CLRN1P58418 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.51□□□□□ -0.25
CLRN1P58418 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
CLRN1P58418 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.5□□□□□ -0.25
CLRN1P58418 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CLRN1P58418 AC007292.2-201ENST00000593524 1812 ntBASIC13.5□□□□□ -0.25
CLRN1P58418 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLRN1P58418 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.5□□□□□ -0.25
CLRN1P58418 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.5□□□□□ -0.25
CLRN1P58418 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLRN1P58418 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLRN1P58418 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLRN1P58418 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLRN1P58418 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLRN1P58418 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.5□□□□□ -0.25
CLRN1P58418 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CLRN1P58418 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLRN1P58418 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.5□□□□□ -0.25
CLRN1P58418 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLRN1P58418 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLRN1P58418 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLRN1P58418 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLRN1P58418 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLRN1P58418 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CLRN1P58418 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.5□□□□□ -0.25
CLRN1P58418 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.5□□□□□ -0.25
CLRN1P58418 API5-211ENST00000534695 560 ntTSL 5 BASIC13.5□□□□□ -0.25
CLRN1P58418 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CLRN1P58418 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.5□□□□□ -0.25
CLRN1P58418 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.5□□□□□ -0.25
CLRN1P58418 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.5□□□□□ -0.25
CLRN1P58418 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms