Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN2P57739 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN2P57739 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLDN2P57739 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLDN2P57739 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLDN2P57739 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN2P57739 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CLDN2P57739 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CLDN2P57739 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLDN2P57739 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.81□□□□□ -0.04
CLDN2P57739 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN2P57739 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN2P57739 AC016700.1-201ENST00000429424 312 ntBASIC14.81□□□□□ -0.04
CLDN2P57739 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.81□□□□□ -0.04
CLDN2P57739 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN2P57739 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.81□□□□□ -0.04
CLDN2P57739 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN2P57739 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN2P57739 NDUFV2P1-201ENST00000596415 907 ntBASIC14.81□□□□□ -0.04
CLDN2P57739 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CLDN2P57739 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CLDN2P57739 AC022748.3-201ENST00000621828 275 ntBASIC14.81□□□□□ -0.04
CLDN2P57739 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.81□□□□□ -0.04
CLDN2P57739 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.81□□□□□ -0.04
CLDN2P57739 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.81□□□□□ -0.04
CLDN2P57739 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLDN2P57739 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.81□□□□□ -0.04
CLDN2P57739 AC023090.2-201ENST00000625182 2110 ntBASIC14.81□□□□□ -0.04
CLDN2P57739 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
CLDN2P57739 E2F3P2-201ENST00000447755 1422 ntBASIC14.81□□□□□ -0.04
CLDN2P57739 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN2P57739 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLDN2P57739 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN2P57739 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CLDN2P57739 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CLDN2P57739 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 AC013268.4-201ENST00000637413 2228 ntBASIC14.8□□□□□ -0.04
CLDN2P57739 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.8□□□□□ -0.04
CLDN2P57739 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.8□□□□□ -0.04
CLDN2P57739 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.8□□□□□ -0.04
CLDN2P57739 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.8□□□□□ -0.04
CLDN2P57739 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.8□□□□□ -0.04
CLDN2P57739 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CLDN2P57739 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.8□□□□□ -0.04
CLDN2P57739 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 AC138649.2-201ENST00000615886 705 ntBASIC14.8□□□□□ -0.04
CLDN2P57739 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 AL138725.1-201ENST00000407347 1314 ntBASIC14.8□□□□□ -0.04
CLDN2P57739 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN2P57739 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CLDN2P57739 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN2P57739 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN2P57739 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.8□□□□□ -0.04
CLDN2P57739 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLDN2P57739 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms