Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC11.21□□□□□ -0.61
CMC4P56277 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
CMC4P56277 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CMC4P56277 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC11.21□□□□□ -0.61
CMC4P56277 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CMC4P56277 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.21□□□□□ -0.61
CMC4P56277 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
CMC4P56277 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC11.21□□□□□ -0.61
CMC4P56277 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC11.21□□□□□ -0.61
CMC4P56277 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.21□□□□□ -0.61
CMC4P56277 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC11.21□□□□□ -0.61
CMC4P56277 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 OR8S1-201ENST00000310194 1080 ntBASIC11.21□□□□□ -0.61
CMC4P56277 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
CMC4P56277 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC11.21□□□□□ -0.61
CMC4P56277 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CMC4P56277 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CMC4P56277 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
CMC4P56277 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC11.21□□□□□ -0.61
CMC4P56277 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC11.21□□□□□ -0.61
CMC4P56277 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
CMC4P56277 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC11.21□□□□□ -0.61
CMC4P56277 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC11.21□□□□□ -0.61
CMC4P56277 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC11.21□□□□□ -0.61
CMC4P56277 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC11.21□□□□□ -0.61
CMC4P56277 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC11.21□□□□□ -0.61
CMC4P56277 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC11.21□□□□□ -0.61
CMC4P56277 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC11.21□□□□□ -0.61
CMC4P56277 AL359881.2-201ENST00000602973 570 ntBASIC11.21□□□□□ -0.61
CMC4P56277 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC11.21□□□□□ -0.61
CMC4P56277 AL512343.1-201ENST00000605837 169 ntBASIC11.21□□□□□ -0.61
CMC4P56277 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC11.21□□□□□ -0.61
CMC4P56277 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
CMC4P56277 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC11.21□□□□□ -0.62
CMC4P56277 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CMC4P56277 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC11.21□□□□□ -0.62
CMC4P56277 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CMC4P56277 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CMC4P56277 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
CMC4P56277 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.21□□□□□ -0.62
CMC4P56277 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.21□□□□□ -0.62
CMC4P56277 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
CMC4P56277 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
CMC4P56277 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC11.21□□□□□ -0.62
CMC4P56277 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CMC4P56277 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CMC4P56277 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CMC4P56277 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
CMC4P56277 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 AC008741.2-201ENST00000612792 3115 ntBASIC11.2□□□□□ -0.62
CMC4P56277 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.2□□□□□ -0.62
CMC4P56277 AL354989.2-201ENST00000435838 1540 ntBASIC11.2□□□□□ -0.62
CMC4P56277 TET3-201ENST00000305799 5174 ntTSL 5 BASIC11.2□□□□□ -0.62
CMC4P56277 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 AC092384.3-202ENST00000564646 2873 ntBASIC11.2□□□□□ -0.62
CMC4P56277 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.2□□□□□ -0.62
CMC4P56277 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC11.2□□□□□ -0.62
CMC4P56277 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 AC112492.5-201ENST00000421897 457 ntBASIC11.2□□□□□ -0.62
CMC4P56277 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.2□□□□□ -0.62
CMC4P56277 GSAP-205ENST00000430584 600 ntTSL 5 BASIC11.2□□□□□ -0.62
CMC4P56277 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC11.2□□□□□ -0.62
CMC4P56277 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC11.2□□□□□ -0.62
CMC4P56277 KRT90P-201ENST00000549264 1064 ntBASIC11.2□□□□□ -0.62
CMC4P56277 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC11.2□□□□□ -0.62
CMC4P56277 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 AC008825.2-201ENST00000603374 718 ntBASIC11.2□□□□□ -0.62
CMC4P56277 AC138466.3-201ENST00000619983 221 ntBASIC11.2□□□□□ -0.62
CMC4P56277 AC138951.2-201ENST00000623455 1161 ntBASIC11.2□□□□□ -0.62
CMC4P56277 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC11.2□□□□□ -0.62
CMC4P56277 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CMC4P56277 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms