Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH15P55291 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH15P55291 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH15P55291 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH15P55291 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CDH15P55291 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH15P55291 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDH15P55291 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH15P55291 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH15P55291 RPL5P21-201ENST00000404620 815 ntBASIC14.15□□□□□ -0.14
CDH15P55291 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH15P55291 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CDH15P55291 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH15P55291 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH15P55291 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH15P55291 KRT18P34-201ENST00000488218 1270 ntBASIC14.15□□□□□ -0.14
CDH15P55291 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.15□□□□□ -0.14
CDH15P55291 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.15□□□□□ -0.14
CDH15P55291 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH15P55291 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.15□□□□□ -0.14
CDH15P55291 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH15P55291 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.15□□□□□ -0.14
CDH15P55291 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH15P55291 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH15P55291 AC105339.1-204ENST00000636249 355 ntBASIC14.15□□□□□ -0.14
CDH15P55291 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH15P55291 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH15P55291 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH15P55291 AC004899.2-201ENST00000622993 3860 ntBASIC14.15□□□□□ -0.14
CDH15P55291 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CDH15P55291 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH15P55291 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH15P55291 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH15P55291 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH15P55291 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH15P55291 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH15P55291 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH15P55291 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH15P55291 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CDH15P55291 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CDH15P55291 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CDH15P55291 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CDH15P55291 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH15P55291 AC016397.2-201ENST00000624848 1985 ntBASIC14.14□□□□□ -0.15
CDH15P55291 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CDH15P55291 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH15P55291 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH15P55291 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.14□□□□□ -0.15
CDH15P55291 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CDH15P55291 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.14□□□□□ -0.15
CDH15P55291 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.14□□□□□ -0.15
CDH15P55291 AC002056.1-201ENST00000395613 760 ntBASIC14.14□□□□□ -0.15
CDH15P55291 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 AC004461.1-201ENST00000412461 403 ntBASIC14.14□□□□□ -0.15
CDH15P55291 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.14□□□□□ -0.15
CDH15P55291 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.14□□□□□ -0.15
CDH15P55291 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.14□□□□□ -0.15
CDH15P55291 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.14□□□□□ -0.15
CDH15P55291 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH15P55291 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.14□□□□□ -0.15
CDH15P55291 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH15P55291 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.14□□□□□ -0.15
CDH15P55291 AC093028.1-201ENST00000622998 982 ntBASIC14.14□□□□□ -0.15
CDH15P55291 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH15P55291 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CDH15P55291 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH15P55291 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH15P55291 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 AL591122.2-201ENST00000624125 1853 ntBASIC14.14□□□□□ -0.15
CDH15P55291 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CDH15P55291 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH15P55291 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 AC055811.4-201ENST00000624039 1754 ntBASIC14.14□□□□□ -0.15
CDH15P55291 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH15P55291 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.14□□□□□ -0.15
CDH15P55291 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CDH15P55291 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH15P55291 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms