Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL513477.1-201ENST00000602865 2407 ntBASIC15.36■□□□□ 0.05
CDH4P55283 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDH4P55283 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH4P55283 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.36■□□□□ 0.05
CDH4P55283 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
CDH4P55283 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.36■□□□□ 0.05
CDH4P55283 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CDH4P55283 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CDH4P55283 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CDH4P55283 AC020910.5-201ENST00000623668 1865 ntBASIC15.35■□□□□ 0.05
CDH4P55283 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CDH4P55283 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH4P55283 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CDH4P55283 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH4P55283 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH4P55283 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH4P55283 CHMP1AP1-201ENST00000445563 662 ntBASIC15.35■□□□□ 0.05
CDH4P55283 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH4P55283 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH4P55283 MIR4741-201ENST00000579822 90 ntBASIC15.35■□□□□ 0.05
CDH4P55283 EEF1DP1-201ENST00000585891 896 ntBASIC15.35■□□□□ 0.05
CDH4P55283 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.35■□□□□ 0.05
CDH4P55283 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CDH4P55283 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH4P55283 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH4P55283 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH4P55283 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 LINC01101-201ENST00000622953 1884 ntBASIC15.35■□□□□ 0.05
CDH4P55283 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CDH4P55283 TSPY26P-202ENST00000565928 3884 ntBASIC15.35■□□□□ 0.05
CDH4P55283 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.35■□□□□ 0.05
CDH4P55283 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CDH4P55283 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.35■□□□□ 0.05
CDH4P55283 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH4P55283 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH4P55283 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH4P55283 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH4P55283 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH4P55283 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH4P55283 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH4P55283 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 AC007274.1-201ENST00000439805 662 ntBASIC15.34■□□□□ 0.05
CDH4P55283 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH4P55283 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH4P55283 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH4P55283 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.34■□□□□ 0.05
CDH4P55283 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH4P55283 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CDH4P55283 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.34■□□□□ 0.05
CDH4P55283 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.34■□□□□ 0.05
CDH4P55283 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH4P55283 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.34■□□□□ 0.05
CDH4P55283 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms