Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC133539.2-201ENST00000604757 467 ntBASIC14.21□□□□□ -0.13
SMSP52788 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMSP52788 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMSP52788 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMSP52788 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMSP52788 AC015656.1-201ENST00000624209 3578 ntBASIC14.21□□□□□ -0.13
SMSP52788 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SMSP52788 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMSP52788 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMSP52788 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SMSP52788 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMSP52788 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SMSP52788 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.21□□□□□ -0.13
SMSP52788 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.21□□□□□ -0.13
SMSP52788 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SMSP52788 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.21□□□□□ -0.14
SMSP52788 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.21□□□□□ -0.14
SMSP52788 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.21□□□□□ -0.14
SMSP52788 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SMSP52788 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SMSP52788 REXO1L6P-201ENST00000603433 1515 ntBASIC14.2□□□□□ -0.14
SMSP52788 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.2□□□□□ -0.14
SMSP52788 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.2□□□□□ -0.14
SMSP52788 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SMSP52788 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.2□□□□□ -0.14
SMSP52788 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SMSP52788 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.2□□□□□ -0.14
SMSP52788 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SMSP52788 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SMSP52788 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SMSP52788 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.2□□□□□ -0.14
SMSP52788 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SMSP52788 FAM86MP-201ENST00000340703 885 ntBASIC14.2□□□□□ -0.14
SMSP52788 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.2□□□□□ -0.14
SMSP52788 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SMSP52788 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.2□□□□□ -0.14
SMSP52788 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.2□□□□□ -0.14
SMSP52788 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.2□□□□□ -0.14
SMSP52788 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.2□□□□□ -0.14
SMSP52788 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.2□□□□□ -0.14
SMSP52788 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SMSP52788 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SMSP52788 KRT8P22-201ENST00000562317 1415 ntBASIC14.2□□□□□ -0.14
SMSP52788 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SMSP52788 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 AL607033.1-201ENST00000623900 1599 ntBASIC14.2□□□□□ -0.14
SMSP52788 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SMSP52788 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SMSP52788 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.2□□□□□ -0.14
SMSP52788 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SMSP52788 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.2□□□□□ -0.14
SMSP52788 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SMSP52788 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.2□□□□□ -0.14
SMSP52788 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMSP52788 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
SMSP52788 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.19□□□□□ -0.14
SMSP52788 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.19□□□□□ -0.14
SMSP52788 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.19□□□□□ -0.14
SMSP52788 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.19□□□□□ -0.14
SMSP52788 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SMSP52788 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.19□□□□□ -0.14
SMSP52788 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SMSP52788 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMSP52788 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms