Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MIR3197-201ENST00000582241 73 ntBASIC15.7■□□□□ 0.1
MMP13P45452 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.7■□□□□ 0.1
MMP13P45452 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.7■□□□□ 0.1
MMP13P45452 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
MMP13P45452 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MMP13P45452 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP13P45452 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.7■□□□□ 0.1
MMP13P45452 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MMP13P45452 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MMP13P45452 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP13P45452 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP13P45452 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP13P45452 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MMP13P45452 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP13P45452 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP13P45452 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP13P45452 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP13P45452 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
MMP13P45452 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.69■□□□□ 0.1
MMP13P45452 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP13P45452 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP13P45452 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.69■□□□□ 0.1
MMP13P45452 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP13P45452 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.69■□□□□ 0.1
MMP13P45452 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MMP13P45452 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP13P45452 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP13P45452 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP13P45452 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP13P45452 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.69■□□□□ 0.1
MMP13P45452 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.69■□□□□ 0.1
MMP13P45452 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP13P45452 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.69■□□□□ 0.1
MMP13P45452 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP13P45452 WASH4P-201ENST00000564273 1246 ntBASIC15.69■□□□□ 0.1
MMP13P45452 AC120045.2-201ENST00000567334 178 ntBASIC15.69■□□□□ 0.1
MMP13P45452 TP53TG3HP-202ENST00000569755 579 ntBASIC15.69■□□□□ 0.1
MMP13P45452 SPDYE22P-201ENST00000582158 798 ntBASIC15.69■□□□□ 0.1
MMP13P45452 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.69■□□□□ 0.1
MMP13P45452 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MMP13P45452 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.69■□□□□ 0.1
MMP13P45452 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.69■□□□□ 0.1
MMP13P45452 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MMP13P45452 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP13P45452 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.69■□□□□ 0.1
MMP13P45452 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP13P45452 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP13P45452 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP13P45452 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP13P45452 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
MMP13P45452 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP13P45452 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 AC015802.1-201ENST00000588104 1449 ntBASIC15.68■□□□□ 0.1
MMP13P45452 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MMP13P45452 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.68■□□□□ 0.1
MMP13P45452 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
MMP13P45452 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.68■□□□□ 0.1
MMP13P45452 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.68■□□□□ 0.1
MMP13P45452 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.68■□□□□ 0.1
MMP13P45452 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.68■□□□□ 0.1
MMP13P45452 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 C1QBPP1-201ENST00000400117 770 ntBASIC15.68■□□□□ 0.1
MMP13P45452 AC104457.1-201ENST00000401024 814 ntBASIC15.68■□□□□ 0.1
MMP13P45452 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.68■□□□□ 0.1
MMP13P45452 AC004066.1-201ENST00000502488 802 ntBASIC15.68■□□□□ 0.1
MMP13P45452 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 AL359711.2-201ENST00000563105 872 ntBASIC15.68■□□□□ 0.1
MMP13P45452 SAMD11P1-201ENST00000571429 661 ntBASIC15.68■□□□□ 0.1
MMP13P45452 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.68■□□□□ 0.1
MMP13P45452 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
MMP13P45452 AC093813.1-201ENST00000605066 256 ntBASIC15.68■□□□□ 0.1
MMP13P45452 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
MMP13P45452 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MMP13P45452 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MMP13P45452 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
MMP13P45452 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.68■□□□□ 0.1
MMP13P45452 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP13P45452 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms