Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC18.67■□□□□ 0.58
RFC4P35249 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RFC4P35249 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.67■□□□□ 0.58
RFC4P35249 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RFC4P35249 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RFC4P35249 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC18.67■□□□□ 0.58
RFC4P35249 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC18.67■□□□□ 0.58
RFC4P35249 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RFC4P35249 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RFC4P35249 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RFC4P35249 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC18.67■□□□□ 0.58
RFC4P35249 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC18.67■□□□□ 0.58
RFC4P35249 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC18.67■□□□□ 0.58
RFC4P35249 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RFC4P35249 AC073911.3-201ENST00000624401 631 ntBASIC18.67■□□□□ 0.58
RFC4P35249 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC18.67■□□□□ 0.58
RFC4P35249 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RFC4P35249 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RFC4P35249 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.67■□□□□ 0.58
RFC4P35249 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.67■□□□□ 0.58
RFC4P35249 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.67■□□□□ 0.58
RFC4P35249 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.67■□□□□ 0.58
RFC4P35249 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC18.67■□□□□ 0.58
RFC4P35249 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.67■□□□□ 0.58
RFC4P35249 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.67■□□□□ 0.58
RFC4P35249 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 AC023090.2-201ENST00000625182 2110 ntBASIC18.67■□□□□ 0.58
RFC4P35249 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFC4P35249 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC4P35249 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC18.66■□□□□ 0.58
RFC4P35249 AC090616.6-203ENST00000579186 1945 ntBASIC18.66■□□□□ 0.58
RFC4P35249 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC4P35249 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.66■□□□□ 0.58
RFC4P35249 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC4P35249 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC4P35249 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.66■□□□□ 0.58
RFC4P35249 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RFC4P35249 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC4P35249 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC4P35249 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC4P35249 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.66■□□□□ 0.58
RFC4P35249 RNA5SP359-201ENST00000364838 113 ntBASIC18.66■□□□□ 0.58
RFC4P35249 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.66■□□□□ 0.58
RFC4P35249 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC18.66■□□□□ 0.58
RFC4P35249 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC18.66■□□□□ 0.58
RFC4P35249 RN7SL81P-201ENST00000493781 261 ntBASIC18.66■□□□□ 0.58
RFC4P35249 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC18.66■□□□□ 0.58
RFC4P35249 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC18.66■□□□□ 0.58
RFC4P35249 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC18.66■□□□□ 0.58
RFC4P35249 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC18.66■□□□□ 0.58
RFC4P35249 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.66■□□□□ 0.58
RFC4P35249 AC025262.2-201ENST00000623975 1056 ntBASIC18.66■□□□□ 0.58
RFC4P35249 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC18.66■□□□□ 0.58
RFC4P35249 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RFC4P35249 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC4P35249 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC4P35249 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RFC4P35249 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC4P35249 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC4P35249 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC18.66■□□□□ 0.58
RFC4P35249 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.66■□□□□ 0.58
RFC4P35249 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
RFC4P35249 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC4P35249 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC4P35249 KRT8P31-201ENST00000504812 1408 ntBASIC18.66■□□□□ 0.58
RFC4P35249 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFC4P35249 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFC4P35249 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.65■□□□□ 0.58
RFC4P35249 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.65■□□□□ 0.58
RFC4P35249 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RFC4P35249 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
RFC4P35249 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RFC4P35249 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFC4P35249 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFC4P35249 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFC4P35249 AC234644.1-201ENST00000406065 370 ntBASIC18.65■□□□□ 0.58
RFC4P35249 HIST2H2BA-201ENST00000412169 381 ntBASIC18.65■□□□□ 0.58
RFC4P35249 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFC4P35249 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RFC4P35249 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC18.65■□□□□ 0.58
RFC4P35249 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms