Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.12■□□□□ 0.33
CNGA1P29973 SAMD11P1-201ENST00000571429 661 ntBASIC17.12■□□□□ 0.33
CNGA1P29973 AL805961.1-203ENST00000641078 1258 ntBASIC17.12■□□□□ 0.33
CNGA1P29973 AC004923.1-202ENST00000642106 209 ntBASIC17.12■□□□□ 0.33
CNGA1P29973 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNGA1P29973 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.12■□□□□ 0.33
CNGA1P29973 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.12■□□□□ 0.33
CNGA1P29973 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.12■□□□□ 0.33
CNGA1P29973 AC092978.1-202ENST00000637590 1327 ntBASIC17.12■□□□□ 0.33
CNGA1P29973 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNGA1P29973 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNGA1P29973 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CNGA1P29973 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNGA1P29973 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNGA1P29973 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.12■□□□□ 0.33
CNGA1P29973 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CNGA1P29973 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CNGA1P29973 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CNGA1P29973 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.12■□□□□ 0.33
CNGA1P29973 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.12■□□□□ 0.33
CNGA1P29973 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.12■□□□□ 0.33
CNGA1P29973 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.12■□□□□ 0.33
CNGA1P29973 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNGA1P29973 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNGA1P29973 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNGA1P29973 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CNGA1P29973 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNGA1P29973 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNGA1P29973 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.11■□□□□ 0.33
CNGA1P29973 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNGA1P29973 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNGA1P29973 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CNGA1P29973 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNGA1P29973 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNGA1P29973 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNGA1P29973 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.11■□□□□ 0.33
CNGA1P29973 AC008267.1-201ENST00000474858 1069 ntBASIC17.11■□□□□ 0.33
CNGA1P29973 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.11■□□□□ 0.33
CNGA1P29973 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNGA1P29973 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.11■□□□□ 0.33
CNGA1P29973 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
CNGA1P29973 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNGA1P29973 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNGA1P29973 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNGA1P29973 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNGA1P29973 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.11■□□□□ 0.33
CNGA1P29973 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.11■□□□□ 0.33
CNGA1P29973 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNGA1P29973 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNGA1P29973 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA1P29973 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA1P29973 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA1P29973 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CNGA1P29973 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.1■□□□□ 0.33
CNGA1P29973 AC004899.1-201ENST00000424687 1714 ntBASIC17.1■□□□□ 0.33
CNGA1P29973 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.1■□□□□ 0.33
CNGA1P29973 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA1P29973 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.1■□□□□ 0.33
CNGA1P29973 AC087481.3-201ENST00000602886 1894 ntBASIC17.1■□□□□ 0.33
CNGA1P29973 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.1■□□□□ 0.33
CNGA1P29973 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA1P29973 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.1■□□□□ 0.33
CNGA1P29973 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA1P29973 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.1■□□□□ 0.33
CNGA1P29973 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.1■□□□□ 0.33
CNGA1P29973 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA1P29973 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA1P29973 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CNGA1P29973 RPL17P11-201ENST00000417593 544 ntBASIC17.1■□□□□ 0.33
CNGA1P29973 AC069218.1-201ENST00000435269 762 ntBASIC17.1■□□□□ 0.33
CNGA1P29973 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.1■□□□□ 0.33
CNGA1P29973 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.1■□□□□ 0.33
CNGA1P29973 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA1P29973 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
CNGA1P29973 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.1■□□□□ 0.33
CNGA1P29973 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.1■□□□□ 0.33
CNGA1P29973 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.1■□□□□ 0.33
CNGA1P29973 BNIP3P13-201ENST00000599968 566 ntBASIC17.1■□□□□ 0.33
CNGA1P29973 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.1■□□□□ 0.33
CNGA1P29973 AC138466.3-201ENST00000619983 221 ntBASIC17.1■□□□□ 0.33
CNGA1P29973 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA1P29973 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CNGA1P29973 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CNGA1P29973 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA1P29973 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA1P29973 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA1P29973 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA1P29973 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA1P29973 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CNGA1P29973 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CNGA1P29973 AC084364.1-201ENST00000551967 1556 ntBASIC17.1■□□□□ 0.33
CNGA1P29973 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.1■□□□□ 0.33
CNGA1P29973 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.1■□□□□ 0.33
CNGA1P29973 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.1■□□□□ 0.33
CNGA1P29973 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNGA1P29973 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA1P29973 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNGA1P29973 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CNGA1P29973 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CNGA1P29973 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms