Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 AC074044.1-201ENST00000609673 707 ntBASIC14.72□□□□□ -0.05
EPHA3P29320 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
EPHA3P29320 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
EPHA3P29320 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.72□□□□□ -0.05
EPHA3P29320 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
EPHA3P29320 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.72□□□□□ -0.05
EPHA3P29320 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.72□□□□□ -0.05
EPHA3P29320 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.72□□□□□ -0.05
EPHA3P29320 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
EPHA3P29320 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
EPHA3P29320 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
EPHA3P29320 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.71□□□□□ -0.05
EPHA3P29320 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
EPHA3P29320 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.71□□□□□ -0.05
EPHA3P29320 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.71□□□□□ -0.05
EPHA3P29320 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
EPHA3P29320 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
EPHA3P29320 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.71□□□□□ -0.05
EPHA3P29320 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.71□□□□□ -0.05
EPHA3P29320 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.71□□□□□ -0.05
EPHA3P29320 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
EPHA3P29320 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.71□□□□□ -0.05
EPHA3P29320 AP000344.2-201ENST00000512987 629 ntBASIC14.71□□□□□ -0.05
EPHA3P29320 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.71□□□□□ -0.05
EPHA3P29320 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.71□□□□□ -0.05
EPHA3P29320 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.71□□□□□ -0.05
EPHA3P29320 AC004835.2-201ENST00000603762 682 ntBASIC14.71□□□□□ -0.05
EPHA3P29320 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.71□□□□□ -0.05
EPHA3P29320 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.71□□□□□ -0.05
EPHA3P29320 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.71□□□□□ -0.05
EPHA3P29320 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
EPHA3P29320 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.71□□□□□ -0.05
EPHA3P29320 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
EPHA3P29320 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EPHA3P29320 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.71□□□□□ -0.06
EPHA3P29320 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
EPHA3P29320 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
EPHA3P29320 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.71□□□□□ -0.06
EPHA3P29320 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
EPHA3P29320 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
EPHA3P29320 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA3P29320 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
EPHA3P29320 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA3P29320 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA3P29320 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA3P29320 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.7□□□□□ -0.06
EPHA3P29320 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA3P29320 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA3P29320 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA3P29320 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA3P29320 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA3P29320 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
EPHA3P29320 AL137783.1-201ENST00000623494 1896 ntBASIC14.7□□□□□ -0.06
EPHA3P29320 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA3P29320 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA3P29320 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA3P29320 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA3P29320 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.7□□□□□ -0.06
EPHA3P29320 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA3P29320 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
EPHA3P29320 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
EPHA3P29320 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA3P29320 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA3P29320 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
EPHA3P29320 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.7□□□□□ -0.06
EPHA3P29320 SPDYE7P-202ENST00000420373 878 ntBASIC14.7□□□□□ -0.06
EPHA3P29320 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms