Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
COL8A2P25067 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.74□□□□□ -0.37
COL8A2P25067 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.74□□□□□ -0.37
COL8A2P25067 AP006547.1-201ENST00000563435 692 ntBASIC12.74□□□□□ -0.37
COL8A2P25067 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
COL8A2P25067 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
COL8A2P25067 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.74□□□□□ -0.37
COL8A2P25067 OR10B1P-201ENST00000601666 907 ntBASIC12.74□□□□□ -0.37
COL8A2P25067 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.74□□□□□ -0.37
COL8A2P25067 AL603764.1-201ENST00000636452 321 ntBASIC12.74□□□□□ -0.37
COL8A2P25067 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.74□□□□□ -0.37
COL8A2P25067 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
COL8A2P25067 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.74□□□□□ -0.37
COL8A2P25067 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.74□□□□□ -0.37
COL8A2P25067 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
COL8A2P25067 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
COL8A2P25067 AC023024.2-201ENST00000623561 1993 ntBASIC12.74□□□□□ -0.37
COL8A2P25067 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.74□□□□□ -0.37
COL8A2P25067 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.74□□□□□ -0.37
COL8A2P25067 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
COL8A2P25067 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.73□□□□□ -0.37
COL8A2P25067 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
COL8A2P25067 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.73□□□□□ -0.37
COL8A2P25067 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
COL8A2P25067 AC139749.1-202ENST00000617529 3139 ntBASIC12.73□□□□□ -0.37
COL8A2P25067 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
COL8A2P25067 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
COL8A2P25067 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.73□□□□□ -0.37
COL8A2P25067 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.73□□□□□ -0.37
COL8A2P25067 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
COL8A2P25067 CLUHP2-201ENST00000426660 1303 ntBASIC12.73□□□□□ -0.37
COL8A2P25067 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.73□□□□□ -0.37
COL8A2P25067 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.73□□□□□ -0.37
COL8A2P25067 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
COL8A2P25067 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.73□□□□□ -0.37
COL8A2P25067 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.73□□□□□ -0.37
COL8A2P25067 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
COL8A2P25067 FAM86HP-204ENST00000513466 959 ntBASIC12.73□□□□□ -0.37
COL8A2P25067 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
COL8A2P25067 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.73□□□□□ -0.37
COL8A2P25067 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
COL8A2P25067 C2orf69P2-201ENST00000562032 1123 ntBASIC12.73□□□□□ -0.37
COL8A2P25067 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.73□□□□□ -0.37
COL8A2P25067 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.73□□□□□ -0.37
COL8A2P25067 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.73□□□□□ -0.37
COL8A2P25067 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
COL8A2P25067 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
COL8A2P25067 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
COL8A2P25067 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
COL8A2P25067 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
COL8A2P25067 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.72□□□□□ -0.37
COL8A2P25067 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
COL8A2P25067 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.72□□□□□ -0.37
COL8A2P25067 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
COL8A2P25067 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
COL8A2P25067 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
COL8A2P25067 KRT8P44-201ENST00000441609 1350 ntBASIC12.72□□□□□ -0.37
COL8A2P25067 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.72□□□□□ -0.37
COL8A2P25067 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
COL8A2P25067 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.72□□□□□ -0.37
COL8A2P25067 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
COL8A2P25067 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
COL8A2P25067 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.72□□□□□ -0.37
COL8A2P25067 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms