Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC007389.4-201ENST00000454674 793 ntBASIC15.23■□□□□ 0.03
HLA-DPA1P20036 AC026434.2-201ENST00000506094 1078 ntBASIC15.23■□□□□ 0.03
HLA-DPA1P20036 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.22■□□□□ 0.03
HLA-DPA1P20036 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 RN7SL837P-201ENST00000463010 287 ntBASIC15.22■□□□□ 0.03
HLA-DPA1P20036 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 AL596325.1-201ENST00000563991 1082 ntBASIC15.22■□□□□ 0.03
HLA-DPA1P20036 AC015936.2-201ENST00000593177 259 ntBASIC15.22■□□□□ 0.03
HLA-DPA1P20036 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DPA1P20036 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 MSTO2P-201ENST00000314835 1709 ntBASIC15.21■□□□□ 0.03
HLA-DPA1P20036 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.21■□□□□ 0.03
HLA-DPA1P20036 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms