Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CCL2P13500 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.18□□□□□ -0.3
CCL2P13500 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL2P13500 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL2P13500 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL2P13500 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CCL2P13500 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL2P13500 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL2P13500 AC018665.1-201ENST00000622927 1362 ntBASIC13.18□□□□□ -0.3
CCL2P13500 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CCL2P13500 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL2P13500 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL2P13500 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL2P13500 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL2P13500 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CCL2P13500 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CCL2P13500 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCL2P13500 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL2P13500 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL2P13500 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CCL2P13500 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCL2P13500 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
CCL2P13500 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL2P13500 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CCL2P13500 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CCL2P13500 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCL2P13500 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CCL2P13500 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL2P13500 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL2P13500 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CCL2P13500 EIF3FP3-201ENST00000434851 1086 ntBASIC13.17□□□□□ -0.3
CCL2P13500 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL2P13500 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL2P13500 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.17□□□□□ -0.3
CCL2P13500 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.17□□□□□ -0.3
CCL2P13500 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.17□□□□□ -0.3
CCL2P13500 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CCL2P13500 CR383656.12-201ENST00000549567 513 ntBASIC13.17□□□□□ -0.3
CCL2P13500 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CCL2P13500 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.17□□□□□ -0.3
CCL2P13500 AC015936.2-201ENST00000593177 259 ntBASIC13.17□□□□□ -0.3
CCL2P13500 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.17□□□□□ -0.3
CCL2P13500 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL2P13500 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL2P13500 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CCL2P13500 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL2P13500 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL2P13500 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL2P13500 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CCL2P13500 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL2P13500 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL2P13500 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL2P13500 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL2P13500 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL2P13500 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL2P13500 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL2P13500 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CCL2P13500 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL2P13500 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
CCL2P13500 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CCL2P13500 AC018529.2-202ENST00000611482 3087 ntBASIC13.16□□□□□ -0.3
CCL2P13500 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL2P13500 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL2P13500 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCL2P13500 ACTBP8-201ENST00000403258 1108 ntBASIC13.16□□□□□ -0.3
CCL2P13500 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms