Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.33□□□□□ -0.44
CGB3P0DN86 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.33□□□□□ -0.44
CGB3P0DN86 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CGB3P0DN86 AC026748.1-201ENST00000624349 3251 ntBASIC12.33□□□□□ -0.44
CGB3P0DN86 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
CGB3P0DN86 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CGB3P0DN86 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.32□□□□□ -0.44
CGB3P0DN86 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.32□□□□□ -0.44
CGB3P0DN86 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.32□□□□□ -0.44
CGB3P0DN86 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.32□□□□□ -0.44
CGB3P0DN86 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
CGB3P0DN86 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.32□□□□□ -0.44
CGB3P0DN86 CU639417.3-201ENST00000624240 1404 ntBASIC12.32□□□□□ -0.44
CGB3P0DN86 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
CGB3P0DN86 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.32□□□□□ -0.44
CGB3P0DN86 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
CGB3P0DN86 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.32□□□□□ -0.44
CGB3P0DN86 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.32□□□□□ -0.44
CGB3P0DN86 INE1-201ENST00000456273 945 ntBASIC12.32□□□□□ -0.44
CGB3P0DN86 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CGB3P0DN86 GCOM2-201ENST00000509133 1104 ntBASIC12.32□□□□□ -0.44
CGB3P0DN86 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CGB3P0DN86 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.32□□□□□ -0.44
CGB3P0DN86 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.32□□□□□ -0.44
CGB3P0DN86 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.32□□□□□ -0.44
CGB3P0DN86 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.32□□□□□ -0.44
CGB3P0DN86 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
CGB3P0DN86 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.32□□□□□ -0.44
CGB3P0DN86 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.32□□□□□ -0.44
CGB3P0DN86 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CGB3P0DN86 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CGB3P0DN86 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.32□□□□□ -0.44
CGB3P0DN86 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.32□□□□□ -0.44
CGB3P0DN86 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.32□□□□□ -0.44
CGB3P0DN86 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CGB3P0DN86 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CGB3P0DN86 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.31□□□□□ -0.44
CGB3P0DN86 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
CGB3P0DN86 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CGB3P0DN86 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CGB3P0DN86 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CGB3P0DN86 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.31□□□□□ -0.44
CGB3P0DN86 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.31□□□□□ -0.44
CGB3P0DN86 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CGB3P0DN86 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CGB3P0DN86 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CGB3P0DN86 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CGB3P0DN86 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CGB3P0DN86 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CGB3P0DN86 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CGB3P0DN86 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CGB3P0DN86 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
CGB3P0DN86 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CGB3P0DN86 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CGB3P0DN86 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CGB3P0DN86 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CGB3P0DN86 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.31□□□□□ -0.44
CGB3P0DN86 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.31□□□□□ -0.44
CGB3P0DN86 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.31□□□□□ -0.44
CGB3P0DN86 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms