Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN1P07384 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN1P07384 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN1P07384 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN1P07384 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN1P07384 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN1P07384 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CAPN1P07384 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.92□□□□□ -0.02
CAPN1P07384 AC112492.5-201ENST00000421897 457 ntBASIC14.92□□□□□ -0.02
CAPN1P07384 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.92□□□□□ -0.02
CAPN1P07384 IGHV3-71-201ENST00000523324 359 ntBASIC14.92□□□□□ -0.02
CAPN1P07384 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.92□□□□□ -0.02
CAPN1P07384 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.92□□□□□ -0.02
CAPN1P07384 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.92□□□□□ -0.02
CAPN1P07384 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.92□□□□□ -0.02
CAPN1P07384 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.92□□□□□ -0.02
CAPN1P07384 RPSAP52-203ENST00000622976 1023 ntBASIC14.92□□□□□ -0.02
CAPN1P07384 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.92□□□□□ -0.02
CAPN1P07384 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN1P07384 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.92□□□□□ -0.02
CAPN1P07384 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.92□□□□□ -0.02
CAPN1P07384 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.92□□□□□ -0.02
CAPN1P07384 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.92□□□□□ -0.02
CAPN1P07384 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.92□□□□□ -0.02
CAPN1P07384 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.92□□□□□ -0.02
CAPN1P07384 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.92□□□□□ -0.02
CAPN1P07384 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CAPN1P07384 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.92□□□□□ -0.02
CAPN1P07384 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.92□□□□□ -0.02
CAPN1P07384 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN1P07384 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CAPN1P07384 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
CAPN1P07384 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CAPN1P07384 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CAPN1P07384 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.91□□□□□ -0.02
CAPN1P07384 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CAPN1P07384 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CAPN1P07384 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.91□□□□□ -0.02
CAPN1P07384 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CAPN1P07384 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CAPN1P07384 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CAPN1P07384 AC104457.1-201ENST00000401024 814 ntBASIC14.91□□□□□ -0.02
CAPN1P07384 TMEM14DP-201ENST00000422205 345 ntBASIC14.91□□□□□ -0.02
CAPN1P07384 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.91□□□□□ -0.02
CAPN1P07384 AC007274.1-201ENST00000439805 662 ntBASIC14.91□□□□□ -0.02
CAPN1P07384 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.91□□□□□ -0.02
CAPN1P07384 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.91□□□□□ -0.02
CAPN1P07384 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
CAPN1P07384 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.91□□□□□ -0.02
CAPN1P07384 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CAPN1P07384 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CAPN1P07384 AL033527.5-201ENST00000641382 801 ntBASIC14.91□□□□□ -0.02
CAPN1P07384 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.91□□□□□ -0.02
CAPN1P07384 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.91□□□□□ -0.02
CAPN1P07384 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CAPN1P07384 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
CAPN1P07384 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CAPN1P07384 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CAPN1P07384 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CAPN1P07384 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
CAPN1P07384 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
CAPN1P07384 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
CAPN1P07384 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.9□□□□□ -0.02
CAPN1P07384 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.9□□□□□ -0.02
CAPN1P07384 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CAPN1P07384 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CAPN1P07384 AC007191.1-201ENST00000623179 2995 ntBASIC14.9□□□□□ -0.02
CAPN1P07384 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms