Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.56□□□□□ -0.4
CTSDP07339 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.56□□□□□ -0.4
CTSDP07339 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.56□□□□□ -0.4
CTSDP07339 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.56□□□□□ -0.4
CTSDP07339 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.56□□□□□ -0.4
CTSDP07339 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.56□□□□□ -0.4
CTSDP07339 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.56□□□□□ -0.4
CTSDP07339 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 AL671883.3-201ENST00000603274 991 ntBASIC12.56□□□□□ -0.4
CTSDP07339 AC003101.2-201ENST00000612557 442 ntBASIC12.56□□□□□ -0.4
CTSDP07339 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CTSDP07339 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.56□□□□□ -0.4
CTSDP07339 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.56□□□□□ -0.4
CTSDP07339 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
CTSDP07339 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.56□□□□□ -0.4
CTSDP07339 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.56□□□□□ -0.4
CTSDP07339 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CTSDP07339 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.56□□□□□ -0.4
CTSDP07339 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CTSDP07339 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 TCAM1P-207ENST00000485295 1537 ntBASIC12.56□□□□□ -0.4
CTSDP07339 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.56□□□□□ -0.4
CTSDP07339 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CTSDP07339 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CTSDP07339 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.55□□□□□ -0.4
CTSDP07339 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CTSDP07339 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CTSDP07339 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
CTSDP07339 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.55□□□□□ -0.4
CTSDP07339 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.55□□□□□ -0.4
CTSDP07339 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.55□□□□□ -0.4
CTSDP07339 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.55□□□□□ -0.4
CTSDP07339 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.55□□□□□ -0.4
CTSDP07339 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CTSDP07339 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CTSDP07339 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.55□□□□□ -0.4
CTSDP07339 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CTSDP07339 TOMM22P5-201ENST00000416399 439 ntBASIC12.55□□□□□ -0.4
CTSDP07339 RPL13P2-201ENST00000440687 659 ntBASIC12.55□□□□□ -0.4
CTSDP07339 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.55□□□□□ -0.4
CTSDP07339 AC004066.1-201ENST00000502488 802 ntBASIC12.55□□□□□ -0.4
CTSDP07339 PGAM5P1-201ENST00000518923 814 ntBASIC12.55□□□□□ -0.4
CTSDP07339 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.55□□□□□ -0.4
CTSDP07339 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.55□□□□□ -0.4
CTSDP07339 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.55□□□□□ -0.4
CTSDP07339 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.55□□□□□ -0.4
CTSDP07339 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.55□□□□□ -0.4
CTSDP07339 AC025048.3-201ENST00000590609 569 ntBASIC12.55□□□□□ -0.4
CTSDP07339 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
CTSDP07339 AC007967.4-201ENST00000614700 386 ntBASIC12.55□□□□□ -0.4
CTSDP07339 AC005702.4-201ENST00000618393 416 ntBASIC12.55□□□□□ -0.4
CTSDP07339 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CTSDP07339 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 AC015818.8-201ENST00000587907 1519 ntBASIC12.55□□□□□ -0.4
CTSDP07339 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.55□□□□□ -0.4
CTSDP07339 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
CTSDP07339 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.55□□□□□ -0.4
CTSDP07339 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.55□□□□□ -0.4
CTSDP07339 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.55□□□□□ -0.4
CTSDP07339 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.55□□□□□ -0.4
CTSDP07339 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.55□□□□□ -0.4
CTSDP07339 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CTSDP07339 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CTSDP07339 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CTSDP07339 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms