Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC016397.2-201ENST00000624848 1985 ntBASIC16.97■□□□□ 0.31
TPM3P06753 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TPM3P06753 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TPM3P06753 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.97■□□□□ 0.31
TPM3P06753 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TPM3P06753 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.97■□□□□ 0.31
TPM3P06753 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TPM3P06753 AC004945.1-201ENST00000416738 983 ntBASIC16.97■□□□□ 0.31
TPM3P06753 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.97■□□□□ 0.31
TPM3P06753 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.97■□□□□ 0.31
TPM3P06753 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TPM3P06753 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC16.97■□□□□ 0.31
TPM3P06753 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TPM3P06753 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TPM3P06753 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TPM3P06753 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.97■□□□□ 0.31
TPM3P06753 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TPM3P06753 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TPM3P06753 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TPM3P06753 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPM3P06753 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.96■□□□□ 0.31
TPM3P06753 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TPM3P06753 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TPM3P06753 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPM3P06753 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPM3P06753 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TPM3P06753 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPM3P06753 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.96■□□□□ 0.31
TPM3P06753 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPM3P06753 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPM3P06753 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TPM3P06753 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPM3P06753 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TPM3P06753 HIST3H2BA-201ENST00000436555 524 ntBASIC16.96■□□□□ 0.31
TPM3P06753 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.96■□□□□ 0.31
TPM3P06753 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPM3P06753 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.96■□□□□ 0.31
TPM3P06753 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
TPM3P06753 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.96■□□□□ 0.31
TPM3P06753 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.96■□□□□ 0.31
TPM3P06753 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPM3P06753 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.96■□□□□ 0.31
TPM3P06753 AC140113.2-201ENST00000604370 208 ntBASIC16.96■□□□□ 0.31
TPM3P06753 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.96■□□□□ 0.31
TPM3P06753 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPM3P06753 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TPM3P06753 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TPM3P06753 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPM3P06753 AC015909.5-201ENST00000624336 2266 ntBASIC16.96■□□□□ 0.31
TPM3P06753 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TPM3P06753 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPM3P06753 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC16.96■□□□□ 0.31
TPM3P06753 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TPM3P06753 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC16.96■□□□□ 0.31
TPM3P06753 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TPM3P06753 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC16.96■□□□□ 0.31
TPM3P06753 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC16.96■□□□□ 0.31
TPM3P06753 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TPM3P06753 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TPM3P06753 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.96■□□□□ 0.3
TPM3P06753 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.96■□□□□ 0.3
TPM3P06753 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
TPM3P06753 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
TPM3P06753 IL9RP2-201ENST00000423948 1312 ntBASIC16.96■□□□□ 0.3
TPM3P06753 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM3P06753 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM3P06753 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM3P06753 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TPM3P06753 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM3P06753 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TPM3P06753 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TPM3P06753 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TPM3P06753 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM3P06753 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC16.95■□□□□ 0.3
TPM3P06753 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TPM3P06753 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
TPM3P06753 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.95■□□□□ 0.3
TPM3P06753 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TPM3P06753 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TPM3P06753 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.95■□□□□ 0.3
TPM3P06753 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.95■□□□□ 0.3
TPM3P06753 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.95■□□□□ 0.3
TPM3P06753 AC009078.2-202ENST00000463353 338 ntBASIC16.95■□□□□ 0.3
TPM3P06753 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.95■□□□□ 0.3
TPM3P06753 AC069335.1-201ENST00000489972 472 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms