Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL5A2P05997 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL5A2P05997 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL5A2P05997 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC19.26■□□□□ 0.67
COL5A2P05997 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL5A2P05997 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
COL5A2P05997 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL5A2P05997 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC19.26■□□□□ 0.67
COL5A2P05997 AL135901.1-201ENST00000451812 333 ntBASIC19.26■□□□□ 0.67
COL5A2P05997 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL5A2P05997 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC19.26■□□□□ 0.67
COL5A2P05997 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC19.26■□□□□ 0.67
COL5A2P05997 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
COL5A2P05997 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL5A2P05997 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC19.26■□□□□ 0.67
COL5A2P05997 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC19.26■□□□□ 0.67
COL5A2P05997 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL5A2P05997 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
COL5A2P05997 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL5A2P05997 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL5A2P05997 PCDHGB8P-201ENST00000502926 1973 ntBASIC19.26■□□□□ 0.67
COL5A2P05997 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
COL5A2P05997 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL5A2P05997 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL5A2P05997 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL5A2P05997 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL5A2P05997 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL5A2P05997 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.25■□□□□ 0.67
COL5A2P05997 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.25■□□□□ 0.67
COL5A2P05997 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
COL5A2P05997 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL5A2P05997 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC19.25■□□□□ 0.67
COL5A2P05997 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
COL5A2P05997 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC19.25■□□□□ 0.67
COL5A2P05997 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL5A2P05997 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC19.25■□□□□ 0.67
COL5A2P05997 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL5A2P05997 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC19.25■□□□□ 0.67
COL5A2P05997 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL5A2P05997 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL5A2P05997 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.25■□□□□ 0.67
COL5A2P05997 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL5A2P05997 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC19.25■□□□□ 0.67
COL5A2P05997 AC018638.5-201ENST00000450885 754 ntBASIC19.25■□□□□ 0.67
COL5A2P05997 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC19.25■□□□□ 0.67
COL5A2P05997 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL5A2P05997 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
COL5A2P05997 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL5A2P05997 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC19.25■□□□□ 0.67
COL5A2P05997 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC19.25■□□□□ 0.67
COL5A2P05997 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
COL5A2P05997 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
COL5A2P05997 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC19.25■□□□□ 0.67
COL5A2P05997 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL5A2P05997 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL5A2P05997 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL5A2P05997 AL365203.3-201ENST00000609742 2057 ntBASIC19.25■□□□□ 0.67
COL5A2P05997 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.25■□□□□ 0.67
COL5A2P05997 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
COL5A2P05997 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL5A2P05997 AL391005.1-201ENST00000623953 2435 ntBASIC19.25■□□□□ 0.67
COL5A2P05997 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL5A2P05997 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC19.25■□□□□ 0.67
COL5A2P05997 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL5A2P05997 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL5A2P05997 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL5A2P05997 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
COL5A2P05997 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL5A2P05997 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC19.24■□□□□ 0.67
COL5A2P05997 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL5A2P05997 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL5A2P05997 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL5A2P05997 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC19.24■□□□□ 0.67
COL5A2P05997 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC19.24■□□□□ 0.67
COL5A2P05997 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC19.24■□□□□ 0.67
COL5A2P05997 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC19.24■□□□□ 0.67
COL5A2P05997 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC19.24■□□□□ 0.67
COL5A2P05997 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC19.24■□□□□ 0.67
COL5A2P05997 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
COL5A2P05997 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL5A2P05997 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
COL5A2P05997 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC19.24■□□□□ 0.67
COL5A2P05997 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL5A2P05997 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC19.24■□□□□ 0.67
COL5A2P05997 TEKT4P2-202ENST00000559466 1312 ntBASIC19.24■□□□□ 0.67
COL5A2P05997 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL5A2P05997 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
COL5A2P05997 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL5A2P05997 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL5A2P05997 FAM90A21P-201ENST00000510875 1396 ntBASIC19.24■□□□□ 0.67
COL5A2P05997 FAM90A15P-201ENST00000514465 1395 ntBASIC19.24■□□□□ 0.67
COL5A2P05997 FAM90A6P-201ENST00000515148 1394 ntBASIC19.24■□□□□ 0.67
COL5A2P05997 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
COL5A2P05997 FAM90A16P-201ENST00000526662 1395 ntBASIC19.24■□□□□ 0.67
COL5A2P05997 FAM90A9P-201ENST00000527940 1395 ntBASIC19.24■□□□□ 0.67
COL5A2P05997 FAM90A5P-201ENST00000528738 1395 ntBASIC19.24■□□□□ 0.67
COL5A2P05997 FAM90A14P-201ENST00000530386 1395 ntBASIC19.24■□□□□ 0.67
COL5A2P05997 FAM90A13P-201ENST00000534703 1395 ntBASIC19.24■□□□□ 0.67
COL5A2P05997 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL5A2P05997 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms